{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,29]],"date-time":"2026-04-29T02:48:30Z","timestamp":1777430910607,"version":"3.51.4"},"reference-count":10,"publisher":"Oxford University Press (OUP)","issue":"3","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2007,2,1]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:p>Summary: Modern structural genomics projects demand for integrated methods for the interpretation and storage of nuclear magnetic resonance (NMR) data. Here we present version 2.1 of our program ARIA (Ambiguous Restraints for Iterative Assignment) for automated assignment of nuclear Overhauser enhancement (NOE) data and NMR structure calculation. We report on recent developments, most notably a graphical user interface, and the incorporation of the object-oriented data model of the Collaborative Computing Project for NMR (CCPN). The CCPN data model defines a storage model for NMR data, which greatly facilitates the transfer of data between different NMR software packages.<\/jats:p><jats:p>Availability: A distribution with the source code of ARIA 2.1 is freely available at<\/jats:p><jats:p>Contact: \u00a0nilges@pasteur.fr<\/jats:p>","DOI":"10.1093\/bioinformatics\/btl589","type":"journal-article","created":{"date-parts":[[2006,11,23]],"date-time":"2006-11-23T01:24:28Z","timestamp":1164245068000},"page":"381-382","source":"Crossref","is-referenced-by-count":516,"title":["ARIA2: Automated NOE assignment and data integration in NMR structure calculation"],"prefix":"10.1093","volume":"23","author":[{"given":"Wolfgang","family":"Rieping","sequence":"first","affiliation":[{"name":"Unit\u00e9 de Bioinformatique structurale, CNRS URA 2185, Institut Pasteur, 25-28 rue du docteur Roux 1 \u00a0 1 \u00a0 \u00a0 75015 Paris, France"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Michael","family":"Habeck","sequence":"additional","affiliation":[{"name":"Unit\u00e9 de Bioinformatique structurale, CNRS URA 2185, Institut Pasteur, 25-28 rue du docteur Roux 1 \u00a0 1 \u00a0 \u00a0 75015 Paris, France"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Benjamin","family":"Bardiaux","sequence":"additional","affiliation":[{"name":"Unit\u00e9 de Bioinformatique structurale, CNRS URA 2185, Institut Pasteur, 25-28 rue du docteur Roux 1 \u00a0 1 \u00a0 \u00a0 75015 Paris, France"},{"name":"Laboratoire de Biochimie Th\u00e9orique, CNRS UPR 9080, Institut de Biologie Physico-Chimique, 13 rue P. et M. Curie 2 \u00a0 2 \u00a0 \u00a0 75005, Paris, France"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Aymeric","family":"Bernard","sequence":"additional","affiliation":[{"name":"Unit\u00e9 de Bioinformatique structurale, CNRS URA 2185, Institut Pasteur, 25-28 rue du docteur Roux 1 \u00a0 1 \u00a0 \u00a0 75015 Paris, France"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Th\u00e9r\u00e8se E.","family":"Malliavin","sequence":"additional","affiliation":[{"name":"Unit\u00e9 de Bioinformatique structurale, CNRS URA 2185, Institut Pasteur, 25-28 rue du docteur Roux 1 \u00a0 1 \u00a0 \u00a0 75015 Paris, France"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Michael","family":"Nilges","sequence":"additional","affiliation":[{"name":"Unit\u00e9 de Bioinformatique structurale, CNRS URA 2185, Institut Pasteur, 25-28 rue du docteur Roux 1 \u00a0 1 \u00a0 \u00a0 75015 Paris, France"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2006,11,22]]},"reference":[{"key":"2023041109381159000_","first-page":"905","article-title":"Crystallography and NMR system (CNS): a new software suite for macromolecular structure determination","volume":"D 54","author":"Bruenger","year":"1998","journal-title":"Acta Crystallogr."},{"key":"2023041109381159000_","first-page":"11678","article-title":"A framework for scientific data modeling and automated software development","volume":"2","author":"Fogh","year":"2005","journal-title":"Bioinformatics"},{"key":"2023041109381159000_","doi-asserted-by":"crossref","first-page":"209","DOI":"10.1016\/S0022-2836(02)00241-3","article-title":"Protein NMR structure determination with automated NOE assignment using the new software candid and the torsion angle dynamics algorithm DYANA","volume":"319","author":"Herrmann","year":"2002","journal-title":"J. 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