{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,30]],"date-time":"2025-10-30T22:16:43Z","timestamp":1761862603601},"reference-count":5,"publisher":"Oxford University Press (OUP)","issue":"4","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2007,2,15]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:p>Summary: The database SCOP (Structural Classification Of Proteins) has become a major resource in bioinformatics and protein science. A particular strength of SCOP is the flexibility of its rules enabling the preservation of the many details spotted by experts in the classification process. Here we endow classic SCOP Families with quantified structural information and comment on the structural diversity found in the SCOP hierarchy.<\/jats:p><jats:p>Availability: Quantified SCOP (QSCOP) is available as a public WEB service.<\/jats:p><jats:p>Contact: \u00a0sippl@came.sbg.ac.at<\/jats:p>","DOI":"10.1093\/bioinformatics\/btl594","type":"journal-article","created":{"date-parts":[[2006,11,25]],"date-time":"2006-11-25T01:13:11Z","timestamp":1164417191000},"page":"513-514","source":"Crossref","is-referenced-by-count":15,"title":["QSCOP\u2014SCOP quantified by structural relationships"],"prefix":"10.1093","volume":"23","author":[{"given":"Stefan J.","family":"Suhrer","sequence":"first","affiliation":[{"name":"Center of Applied Molecular Engineering, Department of Bioinformatics, Division of Molecular Biology, University of Salzburg \u00a0 Hellbrunnerstra\u00dfe 34, 5020 Salzburg, Austria"}]},{"given":"Markus","family":"Wiederstein","sequence":"additional","affiliation":[{"name":"Center of Applied Molecular Engineering, Department of Bioinformatics, Division of Molecular Biology, University of Salzburg \u00a0 Hellbrunnerstra\u00dfe 34, 5020 Salzburg, Austria"}]},{"given":"Manfred J.","family":"Sippl","sequence":"additional","affiliation":[{"name":"Center of Applied Molecular Engineering, Department of Bioinformatics, Division of Molecular Biology, University of Salzburg \u00a0 Hellbrunnerstra\u00dfe 34, 5020 Salzburg, Austria"}]}],"member":"286","published-online":{"date-parts":[[2006,11,24]]},"reference":[{"key":"2023041109272313700_","doi-asserted-by":"crossref","first-page":"D226","DOI":"10.1093\/nar\/gkh039","article-title":"SCOP database in 2004: refinements integrate structure and sequence family data","volume":"32","author":"Andreeva","year":"2004","journal-title":"Nucleic Acids Res."},{"key":"2023041109272313700_","doi-asserted-by":"crossref","first-page":"347","DOI":"10.1126\/science.1121018","article-title":"The impact of structural genomics: expectations and outcomes","volume":"311","author":"Chandonia","year":"2006","journal-title":"Science"},{"key":"2023041109272313700_","doi-asserted-by":"crossref","first-page":"123","DOI":"10.1016\/S1359-0278(96)00021-1","article-title":"Optimum superimposition of protein structures: ambiguities and implications","volume":"1","author":"Feng","year":"1996","journal-title":"Fold. Des."},{"key":"2023041109272313700_","doi-asserted-by":"crossref","first-page":"536","DOI":"10.1016\/S0022-2836(05)80134-2","article-title":"SCOP: a structural classification of proteins database for the investigation of sequences and structures","volume":"247","author":"Murzin","year":"1995","journal-title":"J. Mol. Biol."},{"key":"2023041109272313700_","doi-asserted-by":"crossref","first-page":"55","DOI":"10.1002\/prot.10006","article-title":"Assessment of the CASP4 fold recognition category","volume":"45","author":"Sippl","year":"2001","journal-title":"Proteins"}],"container-title":["Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/23\/4\/513\/49829955\/bioinformatics_23_4_513.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/23\/4\/513\/49829955\/bioinformatics_23_4_513.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,5,9]],"date-time":"2023-05-09T20:45:53Z","timestamp":1683665153000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article\/23\/4\/513\/180254"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2006,11,24]]},"references-count":5,"journal-issue":{"issue":"4","published-print":{"date-parts":[[2007,2,15]]}},"URL":"https:\/\/doi.org\/10.1093\/bioinformatics\/btl594","relation":{},"ISSN":["1367-4811","1367-4803"],"issn-type":[{"value":"1367-4811","type":"electronic"},{"value":"1367-4803","type":"print"}],"subject":[],"published-other":{"date-parts":[[2007,2,15]]},"published":{"date-parts":[[2006,11,24]]}}}