{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,4]],"date-time":"2026-05-04T13:14:08Z","timestamp":1777900448762,"version":"3.51.4"},"reference-count":17,"publisher":"Oxford University Press (OUP)","issue":"7","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2007,4,1]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:p>Summary: We here present a neural network-based method for the prediction of protein phosphorylation sites in yeast\u2014an important model organism for basic research. Existing protein phosphorylation site predictors are primarily based on mammalian data and show reduced sensitivity on yeast phosphorylation sites compared to those in humans, suggesting the need for an yeast-specific phosphorylation site predictor. NetPhosYeast achieves a correlation coefficient close to 0.75 with a sensitivity of 0.84 and specificity of 0.90 and outperforms existing predictors in the identification of phosphorylation sites in yeast.<\/jats:p><jats:p>Availability: The NetPhosYeast prediction service is available as a public web server at http:\/\/www.cbs.dtu.dk\/services\/NetPhosYeast\/<\/jats:p><jats:p>Contact: \u00a0nikob@cbs.dtu.dk<\/jats:p>","DOI":"10.1093\/bioinformatics\/btm020","type":"journal-article","created":{"date-parts":[[2007,2,6]],"date-time":"2007-02-06T01:08:48Z","timestamp":1170724128000},"page":"895-897","source":"Crossref","is-referenced-by-count":110,"title":["NetPhosYeast: prediction of protein phosphorylation sites in yeast"],"prefix":"10.1093","volume":"23","author":[{"given":"Christian R.","family":"Ingrell","sequence":"first","affiliation":[{"name":"1 University of Southern Denmark, Campusvej 55, DK-5230, Odense M, Denmark and 2Center for Biological Sequence Analysis, BioCentrum-DTU, Technical University of Denmark, Anker Engelunds Vej 1, DK-2800 Kgs. Lyngby, Denmark"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Martin L.","family":"Miller","sequence":"additional","affiliation":[{"name":"1 University of Southern Denmark, Campusvej 55, DK-5230, Odense M, Denmark and 2Center for Biological Sequence Analysis, BioCentrum-DTU, Technical University of Denmark, Anker Engelunds Vej 1, DK-2800 Kgs. Lyngby, Denmark"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ole N.","family":"Jensen","sequence":"additional","affiliation":[{"name":"1 University of Southern Denmark, Campusvej 55, DK-5230, Odense M, Denmark and 2Center for Biological Sequence Analysis, BioCentrum-DTU, Technical University of Denmark, Anker Engelunds Vej 1, DK-2800 Kgs. Lyngby, Denmark"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Nikolaj","family":"Blom","sequence":"additional","affiliation":[{"name":"1 University of Southern Denmark, Campusvej 55, DK-5230, Odense M, Denmark and 2Center for Biological Sequence Analysis, BioCentrum-DTU, Technical University of Denmark, Anker Engelunds Vej 1, DK-2800 Kgs. 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