{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,9]],"date-time":"2026-07-09T23:57:28Z","timestamp":1783641448722,"version":"3.55.0"},"reference-count":8,"publisher":"Oxford University Press (OUP)","issue":"7","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2007,4,1]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:p>Summary: We recently implemented improvements to the representation of immunology content of the biological process branch of the Gene Ontology (GO). The aims of the revision were to provide a comprehensive representation of immunological processes and to improve the organization of immunology related terms in the GO to match current concepts in the field of immunology. With these improvements, the GO will better reflect current understanding in the field of immunology and thus prove to be a more valuable resource for knowledge representation in gene annotation and analysis in the areas of immunology related to genomics and bioinformatics.<\/jats:p><jats:p>Availability: \u00a0http:\/\/www.geneontology.org<\/jats:p><jats:p>Contact: \u00a0adiehl@informatics.jax.org<\/jats:p>","DOI":"10.1093\/bioinformatics\/btm029","type":"journal-article","created":{"date-parts":[[2007,2,3]],"date-time":"2007-02-03T01:16:30Z","timestamp":1170465390000},"page":"913-915","source":"Crossref","is-referenced-by-count":46,"title":["Ontology development for biological systems: immunology"],"prefix":"10.1093","volume":"23","author":[{"given":"Alexander D.","family":"Diehl","sequence":"first","affiliation":[{"name":"1 Mouse Genome Informatics, The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04605, 2Department of Pathology and 3Division of Biomedical Informatics, U.T. Southwestern Medical Center, 5323 Harry Hines Blvd. Dallas, TX 75390-9072, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jamie A.","family":"Lee","sequence":"additional","affiliation":[{"name":"1 Mouse Genome Informatics, The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04605, 2Department of Pathology and 3Division of Biomedical Informatics, U.T. Southwestern Medical Center, 5323 Harry Hines Blvd. Dallas, TX 75390-9072, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Richard H.","family":"Scheuermann","sequence":"additional","affiliation":[{"name":"1 Mouse Genome Informatics, The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04605, 2Department of Pathology and 3Division of Biomedical Informatics, U.T. Southwestern Medical Center, 5323 Harry Hines Blvd. Dallas, TX 75390-9072, USA"},{"name":"1 Mouse Genome Informatics, The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04605, 2Department of Pathology and 3Division of Biomedical Informatics, U.T. Southwestern Medical Center, 5323 Harry Hines Blvd. Dallas, TX 75390-9072, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Judith A.","family":"Blake","sequence":"additional","affiliation":[{"name":"1 Mouse Genome Informatics, The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04605, 2Department of Pathology and 3Division of Biomedical Informatics, U.T. Southwestern Medical Center, 5323 Harry Hines Blvd. Dallas, TX 75390-9072, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2007,1,31]]},"reference":[{"key":"2023041108150543700_","doi-asserted-by":"crossref","first-page":"25","DOI":"10.1038\/75556","article-title":"Gene ontology: tool for the unification of biology","volume":"25","author":"Gene Ontology Consortium","year":"2000","journal-title":"Nature Genet"},{"key":"2023041108150543700_","doi-asserted-by":"crossref","first-page":"D322","DOI":"10.1093\/nar\/gkj021","article-title":"The Gene Ontology (GO) project in 2006","volume":"34","author":"Gene Ontology Consortium","year":"2006","journal-title":"Nucleic Acids Res"},{"key":"2023041108150543700_","volume-title":"Immunobiology.","author":"Janeway","year":"2005"},{"key":"2023041108150543700_","doi-asserted-by":"crossref","first-page":"237","DOI":"10.1186\/1471-2105-7-237","article-title":"Components of the antigen processing and presentation pathway revealed by gene expression microarray analysis following B cell antigen receptor (BCR) stimulation","volume":"7","author":"Lee","year":"2006","journal-title":"BMC Bioinformatics"},{"key":"2023041108150543700_","article-title":"Modular decomposition of protein interaction networks","author":"Luo","year":"2006","journal-title":"Bioinformatics"},{"key":"2023041108150543700_","doi-asserted-by":"crossref","first-page":"249","DOI":"10.1111\/j.0105-2896.2004.0119.x","article-title":"Innate immunity in plants and animals: striking similarities and obvious differences","volume":"198","author":"Nurnberger","year":"2004","journal-title":"Immunol. Rev"},{"key":"2023041108150543700_","volume-title":"Fundamental Immunology.","author":"Paul","year":"2003"},{"key":"2023041108150543700_","doi-asserted-by":"crossref","first-page":"497","DOI":"10.1146\/annurev.immunol.24.021605.090542","article-title":"The evolution of adaptive immunity","volume":"24","author":"Pancer","year":"2006","journal-title":"Annu. Rev. Immunol"}],"container-title":["Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/23\/7\/913\/49823236\/bioinformatics_23_7_913.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/23\/7\/913\/49823236\/bioinformatics_23_7_913.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,5,10]],"date-time":"2023-05-10T16:00:52Z","timestamp":1683734452000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article\/23\/7\/913\/217736"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2007,1,31]]},"references-count":8,"journal-issue":{"issue":"7","published-print":{"date-parts":[[2007,4,1]]}},"URL":"https:\/\/doi.org\/10.1093\/bioinformatics\/btm029","relation":{},"ISSN":["1367-4811","1367-4803"],"issn-type":[{"value":"1367-4811","type":"electronic"},{"value":"1367-4803","type":"print"}],"subject":[],"published-other":{"date-parts":[[2007,4,1]]},"published":{"date-parts":[[2007,1,31]]}}}