{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2023,2,2]],"date-time":"2023-02-02T10:40:37Z","timestamp":1675334437397},"reference-count":8,"publisher":"Oxford University Press (OUP)","issue":"2","license":[{"start":{"date-parts":[[2016,10,2]],"date-time":"2016-10-02T00:00:00Z","timestamp":1475366400000},"content-version":"vor","delay-in-days":3235,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/2.0\/uk\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2008,1,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: With the establishment of high-throughput (HT) screening methods there is an increasing need for automatic analysis methods. Here we present RReportGenerator, a user-friendly portal for automatic routine analysis using the statistical platform R and Bioconductor. RReportGenerator is designed to analyze data using predefined analysis scenarios via a graphical user interface (GUI). A report in pdf format combining text, figures and tables is automatically generated and results may be exported. To demonstrate suitable analysis tasks we provide direct web access to a collection of analysis scenarios for summarizing data from transfected cell arrays (TCA), segmentation of CGH data, and microarray quality control and normalization.<\/jats:p>\n               <jats:p>Availability: RReportGenerator, a user manual and a collection of analysis scenarios are available under a GNU public license on http:\/\/www-bio3d-igbmc.u-strasbg.fr\/~wraff<\/jats:p>\n               <jats:p>Contact: \u00a0wolfgang.raffelsberger@igbmc.u-strasbg.fr<\/jats:p>","DOI":"10.1093\/bioinformatics\/btm556","type":"journal-article","created":{"date-parts":[[2007,11,25]],"date-time":"2007-11-25T01:25:21Z","timestamp":1195953921000},"page":"276-278","source":"Crossref","is-referenced-by-count":11,"title":["RReportGenerator: automatic reports from routine statistical analysis using R"],"prefix":"10.1093","volume":"24","author":[{"given":"Wolfgang","family":"Raffelsberger","sequence":"first","affiliation":[{"name":"1 Laboratoire de Bioinformatique et G\u00e9nomique Int\u00e9gratives, IGBMC, UMR 7104, 67404 Illkirch, France and 2Plate-forme \u2018Puces \u00e0 Cellules Transfect\u00e9es\u2019, LBGS, CEBGS-IGBMC, 67404 Illkirch, France"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yannick","family":"Krause","sequence":"additional","affiliation":[{"name":"1 Laboratoire de Bioinformatique et G\u00e9nomique Int\u00e9gratives, IGBMC, UMR 7104, 67404 Illkirch, France and 2Plate-forme \u2018Puces \u00e0 Cellules Transfect\u00e9es\u2019, LBGS, CEBGS-IGBMC, 67404 Illkirch, France"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Luc","family":"Moulinier","sequence":"additional","affiliation":[{"name":"1 Laboratoire de Bioinformatique et G\u00e9nomique Int\u00e9gratives, IGBMC, UMR 7104, 67404 Illkirch, France and 2Plate-forme \u2018Puces \u00e0 Cellules Transfect\u00e9es\u2019, LBGS, CEBGS-IGBMC, 67404 Illkirch, France"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"David","family":"Kieffer","sequence":"additional","affiliation":[{"name":"1 Laboratoire de Bioinformatique et G\u00e9nomique Int\u00e9gratives, IGBMC, UMR 7104, 67404 Illkirch, France and 2Plate-forme \u2018Puces \u00e0 Cellules Transfect\u00e9es\u2019, LBGS, CEBGS-IGBMC, 67404 Illkirch, France"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Anne-Laure","family":"Morand","sequence":"additional","affiliation":[{"name":"1 Laboratoire de Bioinformatique et G\u00e9nomique Int\u00e9gratives, IGBMC, UMR 7104, 67404 Illkirch, France and 2Plate-forme \u2018Puces \u00e0 Cellules Transfect\u00e9es\u2019, LBGS, CEBGS-IGBMC, 67404 Illkirch, France"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Laurent","family":"Brino","sequence":"additional","affiliation":[{"name":"1 Laboratoire de Bioinformatique et G\u00e9nomique 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variance","volume":"19","author":"Bolstad","year":"2003","journal-title":"Bioinformatics"},{"key":"2023020209483892700_B2","doi-asserted-by":"crossref","first-page":"307","DOI":"10.1093\/bioinformatics\/btg405","article-title":"affy \u2013 analysis of Affymetrix GeneChip data at the probe level","volume":"20","author":"Gautier","year":"2004","journal-title":"Bioinformatics"},{"key":"2023020209483892700_B3","doi-asserted-by":"crossref","first-page":"R80","DOI":"10.1186\/gb-2004-5-10-r80","article-title":"Bioconductor: open software development for computational biology and bioinformatics","volume":"5","author":"Gentleman","year":"2004","journal-title":"Genome Biol."},{"key":"2023020209483892700_B4","first-page":"575","article-title":"Sweave: dynamic generation of statistical reports using literate data analysis","volume-title":"Proceedings in Computational 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