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Finally, the new version of BioShell delivers several utility programs that can do typical bioinformatics task from a command-line level.<\/jats:p>\n                  <jats:p>Availability The software is available for download free of charge from its website: http:\/\/bioshell.chem.uw.edu.pl. This website provides also numerous examples, code snippets and API documentation.<\/jats:p>\n                  <jats:p>Contact: \u00a0dgront@chem.uw.edu.pl<\/jats:p>","DOI":"10.1093\/bioinformatics\/btm627","type":"journal-article","created":{"date-parts":[[2008,1,28]],"date-time":"2008-01-28T20:34:06Z","timestamp":1201552446000},"page":"584-585","source":"Crossref","is-referenced-by-count":38,"title":["Utility library for structural bioinformatics"],"prefix":"10.1093","volume":"24","author":[{"given":"Dominik","family":"Gront","sequence":"first","affiliation":[{"name":"University of Warsaw, Faculty of Chemistry, Pasteura 1 02-093 Warsaw, Poland"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andrzej","family":"Kolinski","sequence":"additional","affiliation":[{"name":"University of Warsaw, Faculty of Chemistry, Pasteura 1 02-093 Warsaw, Poland"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2008,1,28]]},"reference":[{"key":"2023020209510004200_B1","doi-asserted-by":"crossref","first-page":"235","DOI":"10.1093\/nar\/28.1.235","article-title":"The protein data bank","volume":"28","author":"Berman","year":"2000","journal-title":"Nucleic Acids Res"},{"key":"2023020209510004200_B2","doi-asserted-by":"crossref","first-page":"3179","DOI":"10.1093\/bioinformatics\/bti450","article-title":"HCPM \u2013 program for hierarchical clustering of protein models","volume":"21","author":"Gront","year":"2005","journal-title":"Bioinformatics"},{"key":"2023020209510004200_B3","doi-asserted-by":"crossref","first-page":"621","DOI":"10.1093\/bioinformatics\/btk037","article-title":"Bioshell \u2013 a package of tools for structural biology computations","volume":"22","author":"Gront","year":"2006","journal-title":"Bioinformatics"},{"key":"2023020209510004200_B4","doi-asserted-by":"crossref","first-page":"1840","DOI":"10.1093\/bioinformatics\/btm259","article-title":"T-pile- a package for thermodynamic calculations for biomolecules","volume":"23","author":"Gront","year":"2007","journal-title":"Bioinformatics"},{"key":"2023020209510004200_B5","doi-asserted-by":"crossref","first-page":"1593","DOI":"10.1002\/jcc.20624","article-title":"Backbone building from quadrilaterals: A fast and accurate algorithm for protein backbone reconstruction from alpha carbon coordinates","volume":"28","author":"Gront","year":"2007","journal-title":"J. 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