{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,12,2]],"date-time":"2025-12-02T15:18:23Z","timestamp":1764688703593},"reference-count":8,"publisher":"Oxford University Press (OUP)","issue":"18","license":[{"start":{"date-parts":[[2016,10,2]],"date-time":"2016-10-02T00:00:00Z","timestamp":1475366400000},"content-version":"vor","delay-in-days":2977,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/2.0\/uk\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2008,9,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: BioJava is a mature open-source project that provides a framework for processing of biological data. BioJava contains powerful analysis and statistical routines, tools for parsing common file formats and packages for manipulating sequences and 3D structures. It enables rapid bioinformatics application development in the Java programming language.<\/jats:p>\n               <jats:p>Availability: BioJava is an open-source project distributed under the Lesser GPL (LGPL). BioJava can be downloaded from the BioJava website (http:\/\/www.biojava.org). BioJava requires Java 1.5 or higher.<\/jats:p>\n               <jats:p>Contact: \u00a0andreas.prlic@gmail.com. All queries should be directed to the BioJava mailing lists. Details are available at http:\/\/biojava.org\/wiki\/BioJava:MailingLists.<\/jats:p>","DOI":"10.1093\/bioinformatics\/btn397","type":"journal-article","created":{"date-parts":[[2008,8,10]],"date-time":"2008-08-10T00:13:46Z","timestamp":1218327226000},"page":"2096-2097","source":"Crossref","is-referenced-by-count":176,"title":["BioJava: an open-source framework for bioinformatics"],"prefix":"10.1093","volume":"24","author":[{"given":"R. C. G.","family":"Holland","sequence":"first","affiliation":[{"name":"1 European Bioinformatics Institute (EMBL-EBI), Genome Campus, Hinxton, Cambridgeshire CB10 1SD, 2Gurdon Institute and Department of Genetics, Cambridge CB2 1QN, 3University Newcaste Upon Tyne, Newcastle Upon Tyne, NE1 7RU, 4Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridgeshire CB10 1SA, 5Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK, 6Laboratory in Genetics and Genomic Medicine of Inflammation, Montreal Heart Institute, Montreal, Canada H1T 1C8, 7Eberhard Karls University T\u00fcbingen, Center for Bioinformatics (ZBIT), T\u00fcbingen, Germany, 8Harbinger Partners, Inc. St. Paul, MN, USA and 9Novartis Institute for Tropical Diseases, 10 Biopolis Road, Chromos #05-01, Singapore 138670"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"T. A.","family":"Down","sequence":"additional","affiliation":[{"name":"1 European Bioinformatics Institute (EMBL-EBI), Genome Campus, Hinxton, Cambridgeshire CB10 1SD, 2Gurdon Institute and Department of Genetics, Cambridge CB2 1QN, 3University Newcaste Upon Tyne, Newcastle Upon Tyne, NE1 7RU, 4Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridgeshire CB10 1SA, 5Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK, 6Laboratory in Genetics and Genomic Medicine of Inflammation, Montreal Heart Institute, Montreal, Canada H1T 1C8, 7Eberhard Karls University T\u00fcbingen, Center for Bioinformatics (ZBIT), T\u00fcbingen, Germany, 8Harbinger Partners, Inc. 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