{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,29]],"date-time":"2026-03-29T13:44:38Z","timestamp":1774791878582,"version":"3.50.1"},"reference-count":9,"publisher":"Oxford University Press (OUP)","issue":"20","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2008,10,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>spolTools is a collection of online programs designed to manipulate and analyze spoligotype datasets of the Mycobacterium tuberculosis complex. These tools are integrated into a repository currently containing 1179 spoligotypes and 6278 isolates across 30 datasets. Users can search this database to export for external use or to pass on to the integrated tools. These tools include the computation of basic population genetic quantities, the visualization of clusters of spoligotype patterns based on an estimated evolutionary history and a procedure to predict emerging strains \u2013 genotypes associated with elevated transmission.<\/jats:p>\n               <jats:p>Availability: Database, programs and documentation may be accessed online at http:\/\/www.emi.unsw.edu.au\/spolTools.<\/jats:p>\n               <jats:p>Contact: \u00a0j.reyes@student.unsw.edu.au; m.tanaka@unsw.edu.au<\/jats:p>","DOI":"10.1093\/bioinformatics\/btn434","type":"journal-article","created":{"date-parts":[[2008,8,19]],"date-time":"2008-08-19T00:14:03Z","timestamp":1219104843000},"page":"2414-2415","source":"Crossref","is-referenced-by-count":49,"title":["spolTools: online utilities for analyzing spoligotypes of the <i>Mycobacterium tuberculosis<\/i> complex"],"prefix":"10.1093","volume":"24","author":[{"given":"Chaka","family":"Tang","sequence":"first","affiliation":[{"name":"1 School of Biotechnology and Biomolecular Sciences, 2Evolution & Ecology Research Centre, University of New South Wales, NSW 2052 and 3School of Computing and Mathematics, University of Western Sydney, NSW 1797, Australia"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Josephine F.","family":"Reyes","sequence":"additional","affiliation":[{"name":"1 School of Biotechnology and Biomolecular Sciences, 2Evolution & Ecology Research Centre, University of New South Wales, NSW 2052 and 3School of Computing and Mathematics, University of Western Sydney, NSW 1797, Australia"},{"name":"1 School of Biotechnology and Biomolecular Sciences, 2Evolution & Ecology Research Centre, University of New South Wales, NSW 2052 and 3School of Computing and Mathematics, University of Western Sydney, NSW 1797, Australia"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Fabio","family":"Luciani","sequence":"additional","affiliation":[{"name":"1 School of Biotechnology and Biomolecular Sciences, 2Evolution & Ecology Research Centre, University of New South Wales, NSW 2052 and 3School of Computing and Mathematics, University of Western Sydney, NSW 1797, Australia"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Andrew R.","family":"Francis","sequence":"additional","affiliation":[{"name":"1 School of Biotechnology and Biomolecular Sciences, 2Evolution & Ecology Research Centre, University of New South Wales, NSW 2052 and 3School of Computing and Mathematics, University of Western Sydney, NSW 1797, Australia"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mark M.","family":"Tanaka","sequence":"additional","affiliation":[{"name":"1 School of Biotechnology and Biomolecular Sciences, 2Evolution & Ecology Research Centre, University of New South Wales, NSW 2052 and 3School of Computing and Mathematics, University of Western Sydney, NSW 1797, Australia"},{"name":"1 School of Biotechnology and Biomolecular Sciences, 2Evolution & Ecology Research Centre, University of New South Wales, NSW 2052 and 3School of Computing and Mathematics, University of Western Sydney, NSW 1797, Australia"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2008,8,18]]},"reference":[{"key":"2023020211252205500_B1","doi-asserted-by":"crossref","first-page":"23","DOI":"10.1186\/1471-2180-6-23","article-title":"Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology","volume":"6","author":"Brudey","year":"2006","journal-title":"BMC Microbiol."},{"key":"2023020211252205500_B2","first-page":"216","article-title":"Spacer oligonucleotide typing of bacteria of the Mycobacterium tuberculosis complex: recommendations for standardised nomenclature","volume":"5","author":"Dale","year":"2001","journal-title":"Int. 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