{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,4]],"date-time":"2026-10-04T01:25:50Z","timestamp":1791077150618,"version":"4.1.0"},"reference-count":8,"publisher":"Oxford University Press (OUP)","issue":"22","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2008,11,15]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:p>Summary: GenMiner is an implementation of association rule discovery dedicated to the analysis of genomic data. It allows the analysis of datasets integrating multiple sources of biological data represented as both discrete values, such as gene annotations, and continuous values, such as gene expression measures. GenMiner implements the new NorDi (normal discretization) algorithm for normalizing and discretizing continuous values and takes advantage of the Close algorithm to efficiently generate minimal non-redundant association rules. Experiments show that execution time and memory usage of GenMiner are significantly smaller than those of the standard Apriori-based approach, as well as the number of extracted association rules.<\/jats:p><jats:p>Availability: The GenMiner software and supplementary materials are available at http:\/\/bioinfo.unice.fr\/publications\/genminer_article\/ and http:\/\/keia.i3s.unice.fr\/?Implementations:GenMiner<\/jats:p><jats:p>Contact: \u00a0pasquier@unice.fr<\/jats:p><jats:p>Supplementary information: \u00a0Supplementary data are available at Bioinformatics online.<\/jats:p>","DOI":"10.1093\/bioinformatics\/btn490","type":"journal-article","created":{"date-parts":[[2008,9,18]],"date-time":"2008-09-18T00:25:03Z","timestamp":1221697503000},"page":"2643-2644","source":"Crossref","is-referenced-by-count":57,"title":["GenMiner: mining non-redundant association rules from integrated gene expression data and annotations"],"prefix":"10.1093","volume":"24","author":[{"given":"Ricardo","family":"Martinez","sequence":"first","affiliation":[{"name":"1 Laboratoire I3S, UNSA\/CNRS UMR-6070, 2000 route des Lucioles, 06903 Valbonne and 2IDBC, UNSA\/CNRS UMR-6543, Parc Valrose, 06108 Nice, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Nicolas","family":"Pasquier","sequence":"additional","affiliation":[{"name":"1 Laboratoire I3S, UNSA\/CNRS UMR-6070, 2000 route des Lucioles, 06903 Valbonne and 2IDBC, UNSA\/CNRS UMR-6543, Parc Valrose, 06108 Nice, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Claude","family":"Pasquier","sequence":"additional","affiliation":[{"name":"1 Laboratoire I3S, UNSA\/CNRS UMR-6070, 2000 route des Lucioles, 06903 Valbonne and 2IDBC, UNSA\/CNRS UMR-6543, Parc Valrose, 06108 Nice, France"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2008,9,17]]},"reference":[{"key":"2023020211390497000_B1","first-page":"478","article-title":"Fast algorithms for mining association rules","volume-title":"Proceedings of the 20th International Conference on Very Large Databases","author":"Agrawal","year":"1994"},{"key":"2023020211390497000_B2","first-page":"255","article-title":"Dynamic itemset counting and implication rules for market basket data","volume-title":"Proceeding of the ACM SIGMOD International Conference on Management of Data","author":"Brin","year":"1997"},{"key":"2023020211390497000_B3","doi-asserted-by":"crossref","first-page":"54","DOI":"10.1186\/1471-2105-7-54","article-title":"Integrated analysis of gene expression by association rules discovery","volume":"7","author":"Carmona-Saez","year":"2006","journal-title":"BMC Bioinformatics"},{"key":"2023020211390497000_B4","first-page":"597","article-title":"Generating an informative cover for association rules","volume-title":"Proceeding of the IEEE International Conference on Data Mining","author":"Cristofor","year":"2002"},{"key":"2023020211390497000_B5","doi-asserted-by":"crossref","first-page":"14863","DOI":"10.1073\/pnas.95.25.14863","article-title":"Cluster analysis and display of genome wide expression patterns","volume":"95","author":"Eisen","year":"1998","journal-title":"Proc. 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