{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,18]],"date-time":"2026-04-18T09:05:58Z","timestamp":1776503158123,"version":"3.51.2"},"reference-count":3,"publisher":"Oxford University Press (OUP)","issue":"2","license":[{"start":{"date-parts":[[2016,10,2]],"date-time":"2016-10-02T00:00:00Z","timestamp":1475366400000},"content-version":"vor","delay-in-days":2868,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/2.0\/uk\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2009,1,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>AmiGO is a web application that allows users to query, browse and visualize ontologies and related gene product annotation (association) data. AmiGO can be used online at the Gene Ontology (GO) website to access the data provided by the GO Consortium1; it can also be downloaded and installed to browse local ontologies and annotations.2 AmiGO is free open source software developed and maintained by the GO Consortium.<\/jats:p>\n               <jats:p>Availability: \u00a0http:\/\/amigo.geneontology.org<\/jats:p>\n               <jats:p>Download: \u00a0http:\/\/sourceforge.net\/projects\/geneontology\/<\/jats:p>\n               <jats:p>Contact: \u00a0sjcarbon@berkeleybop.org<\/jats:p>","DOI":"10.1093\/bioinformatics\/btn615","type":"journal-article","created":{"date-parts":[[2008,11,26]],"date-time":"2008-11-26T01:24:37Z","timestamp":1227662677000},"page":"288-289","source":"Crossref","is-referenced-by-count":1724,"title":["AmiGO: online access to ontology and annotation data"],"prefix":"10.1093","volume":"25","author":[{"given":"Seth","family":"Carbon","sequence":"first","affiliation":[{"name":"1 Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA, 2GO Editorial Office, European Bioinformatics Institute, Hinxton, Cambridge CB10 1SD, UK and 3Department of Energy Joint Genome Institute, Walnut Creek, CA 94598, USA"}]},{"given":"Amelia","family":"Ireland","sequence":"additional","affiliation":[{"name":"1 Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA, 2GO Editorial Office, European Bioinformatics Institute, Hinxton, Cambridge CB10 1SD, UK and 3Department of Energy Joint Genome Institute, Walnut Creek, CA 94598, USA"}]},{"given":"Christopher J.","family":"Mungall","sequence":"additional","affiliation":[{"name":"1 Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA, 2GO Editorial Office, European Bioinformatics Institute, Hinxton, Cambridge CB10 1SD, UK and 3Department of Energy Joint Genome Institute, Walnut Creek, CA 94598, USA"}]},{"given":"ShengQiang","family":"Shu","sequence":"additional","affiliation":[{"name":"1 Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA, 2GO Editorial Office, European Bioinformatics Institute, Hinxton, Cambridge CB10 1SD, UK and 3Department of Energy Joint Genome Institute, Walnut Creek, CA 94598, USA"}]},{"given":"Brad","family":"Marshall","sequence":"additional","affiliation":[{"name":"1 Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA, 2GO Editorial Office, European Bioinformatics Institute, Hinxton, Cambridge CB10 1SD, UK and 3Department of Energy Joint Genome Institute, Walnut Creek, CA 94598, USA"}]},{"given":"Suzanna","family":"Lewis","sequence":"additional","affiliation":[{"name":"1 Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA, 2GO Editorial Office, European Bioinformatics Institute, Hinxton, Cambridge CB10 1SD, UK and 3Department of Energy Joint Genome Institute, Walnut Creek, CA 94598, USA"}]},{"name":"the AmiGO Hub","sequence":"additional","affiliation":[]},{"name":"the Web Presence Working Group","sequence":"additional","affiliation":[]}],"member":"286","published-online":{"date-parts":[[2008,11,25]]},"reference":[{"key":"2023013110003610200_B1","doi-asserted-by":"crossref","first-page":"403","DOI":"10.1016\/S0022-2836(05)80360-2","article-title":"Basic local alignment search tool","volume":"215","author":"Altschul","year":"1990","journal-title":"J. Mol. Biol."},{"key":"2023013110003610200_B2","doi-asserted-by":"crossref","first-page":"3710","DOI":"10.1093\/bioinformatics\/bth456","article-title":"GO::TermFinder\u2014open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes","volume":"20","author":"Boyle","year":"2004","journal-title":"Bioinformatics"},{"key":"2023013110003610200_B3","doi-asserted-by":"crossref","first-page":"25","DOI":"10.1038\/75556","article-title":"Gene Ontology: tool for the unification of biology","volume":"25","author":"Gene Ontology Consortium","year":"2000","journal-title":"Nature Genet"}],"container-title":["Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/25\/2\/288\/48982949\/bioinformatics_25_2_288.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/25\/2\/288\/48982949\/bioinformatics_25_2_288.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,1,31]],"date-time":"2023-01-31T18:25:32Z","timestamp":1675189532000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article\/25\/2\/288\/220714"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2008,11,25]]},"references-count":3,"journal-issue":{"issue":"2","published-print":{"date-parts":[[2009,1,15]]}},"URL":"https:\/\/doi.org\/10.1093\/bioinformatics\/btn615","relation":{},"ISSN":["1367-4811","1367-4803"],"issn-type":[{"value":"1367-4811","type":"electronic"},{"value":"1367-4803","type":"print"}],"subject":[],"published-other":{"date-parts":[[2009,1,15]]},"published":{"date-parts":[[2008,11,25]]}}}