{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,29]],"date-time":"2026-05-29T21:00:19Z","timestamp":1780088419900,"version":"3.54.0"},"reference-count":8,"publisher":"Oxford University Press (OUP)","issue":"4","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2009,2,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: bioDBnet is an online web resource that provides interconnected access to many types of biological databases. It has integrated many of the most commonly used biological databases and in its current state has 153 database identifiers (nodes) covering all aspects of biology including genes, proteins, pathways and other biological concepts. bioDBnet offers various ways to work with these databases including conversions, extensive database reports, custom navigation and has various tools to enhance the quality of the results. Importantly, the access to bioDBnet is updated regularly, providing access to the most recent releases of each individual database.<\/jats:p>\n               <jats:p>Availability: \u00a0http:\/\/biodbnet.abcc.ncifcrf.gov<\/jats:p>\n               <jats:p>Contact: \u00a0stephensr@mail.nih.gov<\/jats:p>\n               <jats:p>Supplementary information: \u00a0Supplementary data are available at Bioinformatics online<\/jats:p>","DOI":"10.1093\/bioinformatics\/btn654","type":"journal-article","created":{"date-parts":[[2009,1,8]],"date-time":"2009-01-08T01:24:23Z","timestamp":1231377863000},"page":"555-556","source":"Crossref","is-referenced-by-count":333,"title":["bioDBnet: the biological database network"],"prefix":"10.1093","volume":"25","author":[{"given":"Uma","family":"Mudunuri","sequence":"first","affiliation":[{"name":"Advanced Biomedical Computing Center, Advanced Technology Program, SAIC-Frederick Inc., NCI-Frederick, Frederick, MD 21702, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Anney","family":"Che","sequence":"additional","affiliation":[{"name":"Advanced Biomedical Computing Center, Advanced Technology Program, SAIC-Frederick Inc., NCI-Frederick, Frederick, MD 21702, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ming","family":"Yi","sequence":"additional","affiliation":[{"name":"Advanced Biomedical Computing Center, Advanced Technology Program, SAIC-Frederick Inc., NCI-Frederick, Frederick, MD 21702, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Robert M.","family":"Stephens","sequence":"additional","affiliation":[{"name":"Advanced Biomedical Computing Center, Advanced Technology Program, SAIC-Frederick Inc., NCI-Frederick, Frederick, MD 21702, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2009,1,7]]},"reference":[{"key":"2023013110100061200_B1","doi-asserted-by":"crossref","first-page":"D235","DOI":"10.1093\/nar\/gkj153","article-title":"BIOZON: a hub of heterogenous biological data","volume":"34","author":"Birkland","year":"2006","journal-title":"Nucleic Acids Res."},{"key":"2023013110100061200_B2","doi-asserted-by":"crossref","DOI":"10.1007\/978-3-540-24741-8_47","article-title":"Flexible integration of Molecular-biological Annotation Data: The GenMapper Approach","volume-title":"Proceedings of Advances in Database Technology, Heraklion, Greece.","author":"Do","year":"2004"},{"key":"2023013110100061200_B3","doi-asserted-by":"crossref","first-page":"114","DOI":"10.1016\/S0076-6879(96)66010-8","article-title":"SRS: information retrieval system for molecular biology data banks","volume":"266","author":"Etzold","year":"1996","journal-title":"Methods Enzymol."},{"key":"2023013110100061200_B4","doi-asserted-by":"crossref","first-page":"R183","DOI":"10.1186\/gb-2007-8-9-r183","article-title":"The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists","volume":"8","author":"Huang da","year":"2007","journal-title":"Genome Biol."},{"key":"2023013110100061200_B5","doi-asserted-by":"crossref","first-page":"996","DOI":"10.1101\/gr.229102","article-title":"The human genome browser at UCSC","volume":"12","author":"Kent","year":"2002","journal-title":"Genome Res."},{"key":"2023013110100061200_B6","doi-asserted-by":"crossref","first-page":"170","DOI":"10.1186\/1471-2105-7-170","article-title":"BioWarehouse: a bioinformatics database warehouse toolkit","volume":"7","author":"Lee","year":"2006","journal-title":"BMC Bioinformatics"},{"key":"2023013110100061200_B7","doi-asserted-by":"crossref","first-page":"34","DOI":"10.1186\/1471-2105-6-34","article-title":"Atlas - 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