{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,29]],"date-time":"2025-10-29T19:12:14Z","timestamp":1761765134856},"reference-count":7,"publisher":"Oxford University Press (OUP)","issue":"4","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2009,2,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: To analyse the vast amount of genome annotation data available today, a visual representation of genomic features in a given sequence range is required. We developed a C library which provides layout and drawing capabilities for annotation features. It supports several common input and output formats and can easily be integrated into custom C applications. To exemplify the use of AnnotationSketch in other languages, we provide bindings to the scripting languages Ruby, Python and Lua.<\/jats:p>\n               <jats:p>Availability: The software is available under an open-source license as part of GenomeTools (http:\/\/genometools.org\/annotationsketch.html).<\/jats:p>\n               <jats:p>Contact: \u00a0steinbiss@zbh.uni-hamburg.de<\/jats:p>","DOI":"10.1093\/bioinformatics\/btn657","type":"journal-article","created":{"date-parts":[[2008,12,24]],"date-time":"2008-12-24T01:25:26Z","timestamp":1230081926000},"page":"533-534","source":"Crossref","is-referenced-by-count":23,"title":["<i>AnnotationSketch<\/i>: a genome annotation drawing library"],"prefix":"10.1093","volume":"25","author":[{"given":"Sascha","family":"Steinbiss","sequence":"first","affiliation":[{"name":"Center for Bioinformatics, University of Hamburg, Bundesstra\u00dfe 43, 20146 Hamburg, Germany"}]},{"given":"Gordon","family":"Gremme","sequence":"additional","affiliation":[{"name":"Center for Bioinformatics, University of Hamburg, Bundesstra\u00dfe 43, 20146 Hamburg, Germany"}]},{"given":"Christin","family":"Sch\u00e4rfer","sequence":"additional","affiliation":[{"name":"Center for Bioinformatics, University of Hamburg, Bundesstra\u00dfe 43, 20146 Hamburg, Germany"}]},{"given":"Malte","family":"Mader","sequence":"additional","affiliation":[{"name":"Center for Bioinformatics, University of Hamburg, Bundesstra\u00dfe 43, 20146 Hamburg, Germany"}]},{"given":"Stefan","family":"Kurtz","sequence":"additional","affiliation":[{"name":"Center for Bioinformatics, University of Hamburg, Bundesstra\u00dfe 43, 20146 Hamburg, Germany"}]}],"member":"286","published-online":{"date-parts":[[2008,12,23]]},"reference":[{"key":"2023013110114306300_B1","first-page":"R44","article-title":"The sequence ontology: a tool for the unification of genome annotations","volume-title":"Genome Biol.","author":"Eilbeck","year":"2005"},{"key":"2023013110114306300_B2","doi-asserted-by":"crossref","first-page":"996","DOI":"10.1101\/gr.229102","article-title":"The human genome browser at UCSC","volume":"12","author":"Kent","year":"2002","journal-title":"Genome Res."},{"key":"2023013110114306300_B3","first-page":"RESEARCH0082","article-title":"Apollo: a sequence annotation editor","volume-title":"Genome Biol.","author":"Lewis","year":"2002"},{"key":"2023013110114306300_B4","first-page":"1611","article-title":"The bioperl toolkit: perl modules for the life sciences","volume-title":"Genome Res.","author":"Stajich","year":"2002"},{"key":"2023013110114306300_B5"},{"key":"2023013110114306300_B6","doi-asserted-by":"crossref","first-page":"1599","DOI":"10.1101\/gr.403602","article-title":"The generic genome browser: a building block for a model organism system database","volume":"12","author":"Stein","year":"2002","journal-title":"Genome Res."},{"key":"2023013110114306300_B7","article-title":"Cairo: cross-device rendering for vector graphics","volume-title":"Proceedings of the 2003 Linux Symposium.","author":"Worth","year":"2003"}],"container-title":["Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/25\/4\/533\/48984902\/bioinformatics_25_4_533.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/25\/4\/533\/48984902\/bioinformatics_25_4_533.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,1,31]],"date-time":"2023-01-31T18:28:19Z","timestamp":1675189699000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article\/25\/4\/533\/249853"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2008,12,23]]},"references-count":7,"journal-issue":{"issue":"4","published-print":{"date-parts":[[2009,2,15]]}},"URL":"https:\/\/doi.org\/10.1093\/bioinformatics\/btn657","relation":{},"ISSN":["1367-4811","1367-4803"],"issn-type":[{"value":"1367-4811","type":"electronic"},{"value":"1367-4803","type":"print"}],"subject":[],"published-other":{"date-parts":[[2009,2,15]]},"published":{"date-parts":[[2008,12,23]]}}}