{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,23]],"date-time":"2025-10-23T16:40:08Z","timestamp":1761237608450},"reference-count":15,"publisher":"Oxford University Press (OUP)","issue":"9","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2009,5,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: New high-resolution approaches for mapping ultrastructure of cells in 3D are leading to unprecedented quantities of spatial data. Here we present Illoura, a software tool for the integrated management, analysis and visualization of these data within a semantic context, and illustrate its capability by analysis of spatial relationships in mammalian beta cells.<\/jats:p>\n               <jats:p>Availability: \u00a0http:\/\/www.visiblecell.com\/illoura<\/jats:p>\n               <jats:p>Contact: \u00a0m.ragan@uq.edu.au<\/jats:p>\n               <jats:p>Supplementary information: \u00a0Supplementary data are available at Bioinformatics online.<\/jats:p>","DOI":"10.1093\/bioinformatics\/btp125","type":"journal-article","created":{"date-parts":[[2009,3,4]],"date-time":"2009-03-04T02:44:03Z","timestamp":1236134643000},"page":"1208-1210","source":"Crossref","is-referenced-by-count":11,"title":["Illoura\u2122: a software tool for analysis, visualization and semantic querying of cellular and other spatial biological data"],"prefix":"10.1093","volume":"25","author":[{"given":"Tim","family":"McComb","sequence":"first","affiliation":[{"name":"1 Institute for Molecular Bioscience, 2ARC Centre of Excellence in Bioinformatics and 3Centre for Microscopy and Microanalysis, The University of Queensland, Brisbane, Queensland 4072, Australia"},{"name":"1 Institute for Molecular Bioscience, 2ARC Centre of Excellence in Bioinformatics and 3Centre for Microscopy and Microanalysis, The University of Queensland, Brisbane, Queensland 4072, Australia"}]},{"given":"Oliver","family":"Cairncross","sequence":"additional","affiliation":[{"name":"1 Institute for Molecular Bioscience, 2ARC Centre of Excellence in Bioinformatics and 3Centre for Microscopy and Microanalysis, The University of Queensland, Brisbane, Queensland 4072, Australia"},{"name":"1 Institute for Molecular Bioscience, 2ARC Centre of Excellence in Bioinformatics and 3Centre for Microscopy and Microanalysis, The University of Queensland, Brisbane, Queensland 4072, Australia"}]},{"given":"Andrew B.","family":"Noske","sequence":"additional","affiliation":[{"name":"1 Institute for Molecular Bioscience, 2ARC Centre of Excellence in Bioinformatics and 3Centre for Microscopy and Microanalysis, The University of Queensland, Brisbane, Queensland 4072, Australia"},{"name":"1 Institute for Molecular Bioscience, 2ARC Centre of Excellence in Bioinformatics and 3Centre for Microscopy and Microanalysis, The University of Queensland, Brisbane, Queensland 4072, Australia"}]},{"given":"David L. 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