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CodonExplorer, available online at http:\/\/bmf.colorado.edu\/codonexplorer\/, is an online tool and interactive database that contains millions of genes, allowing rapid exploration of the factors governing gene and genome compositional evolution and exploiting GC content and codon usage frequency to identify genes with composition suggesting high levels of expression or horizontal transfer.<\/jats:p>\n               <jats:p>Contact: \u00a0rob@spot.colorado.edu<\/jats:p>","DOI":"10.1093\/bioinformatics\/btp141","type":"journal-article","created":{"date-parts":[[2009,3,12]],"date-time":"2009-03-12T01:41:21Z","timestamp":1236822081000},"page":"1331-1332","source":"Crossref","is-referenced-by-count":3,"title":["CodonExplorer: an online tool for analyzing codon usage and sequence composition, scaling from genes to genomes"],"prefix":"10.1093","volume":"25","author":[{"given":"Micah","family":"Hamady","sequence":"first","affiliation":[{"name":"1 Department of Computer Science, University of Colorado, Boulder, CO 80309, 2AmGen, 4000 Nelson Rd, Longmont, CO 80503, 3Department of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder, CO 80309, 4Department of Ecology and Evolutionary Biology, University of California, Irvine, CA 92697 and 5Department of Chemistry and Biochemistry, University of Colorado, Boulder, CO 80309, USA"}]},{"given":"Stephanie A.","family":"Wilson","sequence":"additional","affiliation":[{"name":"1 Department of Computer Science, University of Colorado, Boulder, CO 80309, 2AmGen, 4000 Nelson Rd, Longmont, CO 80503, 3Department of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder, CO 80309, 4Department of Ecology and Evolutionary Biology, University of California, Irvine, CA 92697 and 5Department of Chemistry and Biochemistry, University of Colorado, Boulder, CO 80309, USA"}]},{"given":"Jesse","family":"Zaneveld","sequence":"additional","affiliation":[{"name":"1 Department of Computer Science, University of Colorado, Boulder, CO 80309, 2AmGen, 4000 Nelson Rd, Longmont, CO 80503, 3Department of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder, CO 80309, 4Department of Ecology and Evolutionary Biology, University of California, Irvine, CA 92697 and 5Department of Chemistry and Biochemistry, University of Colorado, Boulder, CO 80309, USA"}]},{"given":"Noboru","family":"Sueoka","sequence":"additional","affiliation":[{"name":"1 Department of Computer Science, University of Colorado, Boulder, CO 80309, 2AmGen, 4000 Nelson Rd, Longmont, CO 80503, 3Department of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder, CO 80309, 4Department of Ecology and Evolutionary Biology, University of California, Irvine, CA 92697 and 5Department of Chemistry and Biochemistry, University of Colorado, Boulder, CO 80309, USA"}]},{"given":"Rob","family":"Knight","sequence":"additional","affiliation":[{"name":"1 Department of Computer Science, University of Colorado, Boulder, CO 80309, 2AmGen, 4000 Nelson Rd, Longmont, CO 80503, 3Department of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder, CO 80309, 4Department of Ecology and Evolutionary Biology, University of California, Irvine, CA 92697 and 5Department of Chemistry and Biochemistry, University of Colorado, Boulder, CO 80309, USA"}]}],"member":"286","published-online":{"date-parts":[[2009,3,11]]},"reference":[{"key":"2023013110284664800_B1","first-page":"186","article-title":"The vertebrate genome: isochores and evolution","volume":"10","author":"Bernardi","year":"1993","journal-title":"Mol. 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