{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,8,26]],"date-time":"2024-08-26T13:06:53Z","timestamp":1724677613859},"reference-count":6,"publisher":"Oxford University Press (OUP)","issue":"11","license":[{"start":{"date-parts":[[2016,10,2]],"date-time":"2016-10-02T00:00:00Z","timestamp":1475366400000},"content-version":"vor","delay-in-days":2756,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/2.0\/uk\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2009,6,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary:We present a visualization tool applied on genome-wide association data, revealing disease-associated haplotypes, epistatically interacting loci, as well as providing visual signatures of multivariate correlations of genetic markers with respect to a phenotype.<\/jats:p>\n               <jats:p>Availability:Freely available on the web at: http:\/\/www.ee.columbia.edu\/~anastas\/sdplots<\/jats:p>\n               <jats:p>Contact: \u00a0anastas@ee.columbia.edu<\/jats:p>\n               <jats:p>Supplementary information: \u00a0Supplementary data are available at Bioinformatics online.<\/jats:p>","DOI":"10.1093\/bioinformatics\/btp159","type":"journal-article","created":{"date-parts":[[2009,3,19]],"date-time":"2009-03-19T00:24:17Z","timestamp":1237422257000},"page":"1445-1446","source":"Crossref","is-referenced-by-count":4,"title":["Synergy Disequilibrium Plots: graphical visualization of pairwise synergies and redundancies of SNPs with respect to a phenotype"],"prefix":"10.1093","volume":"25","author":[{"given":"John","family":"Watkinson","sequence":"first","affiliation":[{"name":"Center for Computational Biology and Bioinformatics, Department of Electrical Engineering, Columbia University, 500 West 120th Street, New York, NY 10027, USA"}]},{"given":"Dimitris","family":"Anastassiou","sequence":"additional","affiliation":[{"name":"Center for Computational Biology and Bioinformatics, Department of Electrical Engineering, Columbia University, 500 West 120th Street, New York, NY 10027, USA"}]}],"member":"286","published-online":{"date-parts":[[2009,3,17]]},"reference":[{"key":"2023013111545705400_B1","doi-asserted-by":"crossref","first-page":"83","DOI":"10.1038\/msb4100124","article-title":"Computational analysis of the synergy among multiple interacting genes","volume":"3","author":"Anastassiou","year":"2007","journal-title":"Mol. Syst. Biol."},{"key":"2023013111545705400_B2","doi-asserted-by":"crossref","first-page":"1461","DOI":"10.1126\/science.1135245","article-title":"A genome-wide association study identifies IL23R as an inflammatory bowel disease gene","volume":"314","author":"Duerr","year":"2006","journal-title":"Science"},{"key":"2023013111545705400_B3","doi-asserted-by":"crossref","first-page":"1084","DOI":"10.2337\/db07-1331","article-title":"HLA DR-DQ haplotypes and genotypes and type 1 diabetes risk: analysis of the type 1 diabetes genetics consortium families","volume":"57","author":"Erlich","year":"2008","journal-title":"Diabetes"},{"key":"2023013111545705400_B4","doi-asserted-by":"crossref","first-page":"381","DOI":"10.1038\/sj.gene.6364106","article-title":"Genotype effects and epistasis in type 1 diabetes and HLA-DQ trans dimer associations with disease","volume":"5","author":"Koeleman","year":"2004","journal-title":"Genes Immun."},{"key":"2023013111545705400_B5","doi-asserted-by":"crossref","first-page":"e68","DOI":"10.1371\/journal.pcbi.0020068","article-title":"Inference of disease-related molecular logic from systems-based microarray analysis","volume":"2","author":"Varadan","year":"2006","journal-title":"PLoS Comput. Biol."},{"key":"2023013111545705400_B6","first-page":"661","article-title":"Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.","volume-title":"Nature.","author":"Wellcome Trust Case Control Consortium","year":"2007"}],"container-title":["Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/25\/11\/1445\/48988023\/bioinformatics_25_11_1445.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/25\/11\/1445\/48988023\/bioinformatics_25_11_1445.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,1,31]],"date-time":"2023-01-31T18:35:28Z","timestamp":1675190128000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article\/25\/11\/1445\/330515"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2009,3,17]]},"references-count":6,"journal-issue":{"issue":"11","published-print":{"date-parts":[[2009,6,1]]}},"URL":"https:\/\/doi.org\/10.1093\/bioinformatics\/btp159","relation":{},"ISSN":["1367-4811","1367-4803"],"issn-type":[{"value":"1367-4811","type":"electronic"},{"value":"1367-4803","type":"print"}],"subject":[],"published-other":{"date-parts":[[2009,6,1]]},"published":{"date-parts":[[2009,3,17]]}}}