{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,18]],"date-time":"2026-05-18T12:26:02Z","timestamp":1779107162618,"version":"3.51.4"},"reference-count":8,"publisher":"Oxford University Press (OUP)","issue":"11","license":[{"start":{"date-parts":[[2016,10,2]],"date-time":"2016-10-02T00:00:00Z","timestamp":1475366400000},"content-version":"vor","delay-in-days":2750,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/2.0\/uk\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2009,6,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: The XML-based Systems Biology Markup Language (SBML) has emerged as a standard for storage, communication and interchange of models in systems biology. As a machine-readable format XML is difficult for humans to read and understand. Many tools are available that visualize the reaction pathways stored in SBML files, but many components, e.g. unit declarations, complex kinetic equations or links to MIRIAM resources, are often not made visible in these diagrams. For a broader understanding of the models, support in scientific writing and error detection, a human-readable report of the complete model is needed. We present SBML2LaTEX, a Java-based stand-alone program to fill this gap. A convenient web service allows users to directly convert SBML to various formats, including DVI, LaTEX and PDF, and provides many settings for customization.<\/jats:p>\n               <jats:p>Availability: Source code, documentation and a web service are freely available at http:\/\/www.ra.cs.uni-tuebingen.de\/software\/SBML2LaTeX.<\/jats:p>\n               <jats:p>Contact: \u00a0andreas.draeger@uni-tuebingen.de<\/jats:p>\n               <jats:p>Supplementary information: \u00a0Supplementary data are available at Bioinformatics online.<\/jats:p>","DOI":"10.1093\/bioinformatics\/btp170","type":"journal-article","created":{"date-parts":[[2009,3,24]],"date-time":"2009-03-24T00:26:41Z","timestamp":1237854401000},"page":"1455-1456","source":"Crossref","is-referenced-by-count":27,"title":["SBML2L<scp>a<\/scp>TEX: Conversion of SBML files into human-readable reports"],"prefix":"10.1093","volume":"25","author":[{"given":"Andreas","family":"Dr\u00e4ger","sequence":"first","affiliation":[{"name":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hannes","family":"Planatscher","sequence":"additional","affiliation":[{"name":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Dieudonn\u00e9","family":"Motsou Wouamba","sequence":"additional","affiliation":[{"name":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Adrian","family":"Schr\u00f6der","sequence":"additional","affiliation":[{"name":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Michael","family":"Hucka","sequence":"additional","affiliation":[{"name":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Lukas","family":"Endler","sequence":"additional","affiliation":[{"name":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Martin","family":"Golebiewski","sequence":"additional","affiliation":[{"name":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wolfgang","family":"M\u00fcller","sequence":"additional","affiliation":[{"name":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Andreas","family":"Zell","sequence":"additional","affiliation":[{"name":"1 Center for Bioinformatics T\u00fcbingen (ZBIT), University of T\u00fcbingen, T\u00fcbingen, Germany, 2Beckman Institute BNMC, California Institute of Technology, Pasadena, CA, USA, 3European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK and 4Scientific Databases and Visualization Group, EML Research gGmbH, Heidelberg, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2009,3,23]]},"reference":[{"key":"2023013111544956400_B1","doi-asserted-by":"crossref","first-page":"880","DOI":"10.1093\/bioinformatics\/btn051","article-title":"LibSBML: an API Library for 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