{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,8]],"date-time":"2026-04-08T05:45:53Z","timestamp":1775627153337,"version":"3.50.1"},"reference-count":5,"publisher":"Oxford University Press (OUP)","issue":"15","license":[{"start":{"date-parts":[[2016,10,2]],"date-time":"2016-10-02T00:00:00Z","timestamp":1475366400000},"content-version":"vor","delay-in-days":2725,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/2.0\/uk\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2009,8,1]]},"abstract":"Abstract<\/jats:title>\n Summary: High-resolution, three-dimensional (3D) imaging of large biological specimens generates massive image datasets that are difficult to navigate, annotate and share effectively. Inspired by online mapping applications like GoogleMaps\u2122, we developed a decentralized web interface that allows seamless navigation of arbitrarily large image stacks. Our interface provides means for online, collaborative annotation of the biological image data and seamless sharing of regions of interest by bookmarking. The CATMAID interface enables synchronized navigation through multiple registered datasets even at vastly different scales such as in comparisons between optical and electron microscopy.<\/jats:p>\n Availability: \u00a0http:\/\/fly.mpi-cbg.de\/catmaid<\/jats:p>\n Contact: \u00a0tomancak@mpi-cbg.de<\/jats:p>","DOI":"10.1093\/bioinformatics\/btp266","type":"journal-article","created":{"date-parts":[[2009,4,18]],"date-time":"2009-04-18T00:34:24Z","timestamp":1240014864000},"page":"1984-1986","source":"Crossref","is-referenced-by-count":396,"title":["CATMAID: collaborative annotation toolkit for massive amounts of image data"],"prefix":"10.1093","volume":"25","author":[{"given":"Stephan","family":"Saalfeld","sequence":"first","affiliation":[{"name":"1 Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstra\u00dfe 108, Dresden, Germany , 2 Institute of Neuroinformatics, Uni\/ETH Z\u00fcrich, Winterthurerstrasse 190, Z\u00fcrich, Switzerland and 3 Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles, USA"}]},{"given":"Albert","family":"Cardona","sequence":"additional","affiliation":[{"name":"1 Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstra\u00dfe 108, Dresden, Germany , 2 Institute of Neuroinformatics, Uni\/ETH Z\u00fcrich, Winterthurerstrasse 190, Z\u00fcrich, Switzerland and 3 Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles, USA"}]},{"given":"Volker","family":"Hartenstein","sequence":"additional","affiliation":[{"name":"1 Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstra\u00dfe 108, Dresden, Germany , 2 Institute of Neuroinformatics, Uni\/ETH Z\u00fcrich, Winterthurerstrasse 190, Z\u00fcrich, Switzerland and 3 Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles, USA"}]},{"given":"Pavel","family":"Toman\u010d\u00e1k","sequence":"additional","affiliation":[{"name":"1 Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstra\u00dfe 108, Dresden, Germany , 2 Institute of Neuroinformatics, Uni\/ETH Z\u00fcrich, Winterthurerstrasse 190, Z\u00fcrich, Switzerland and 3 Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles, USA"}]}],"member":"286","published-online":{"date-parts":[[2009,4,17]]},"reference":[{"key":"2023013112094876700_B1","article-title":"TrakEM2: an ImageJ-based program for morphological data mining and 3d modeling","volume-title":"Proceedings of the ImageJ User and Developer Conference","author":"Cardona","year":"2006"},{"key":"2023013112094876700_B2","doi-asserted-by":"crossref","first-page":"168","DOI":"10.1038\/nature05453","article-title":"Genome-wide atlas of gene expression in the adult mouse brain","volume":"445","author":"Lein","year":"2007","journal-title":"Nature"},{"key":"2023013112094876700_B3","doi-asserted-by":"crossref","first-page":"9","DOI":"10.1016\/j.neuroimage.2006.11.053","article-title":"Internet-enabled high-resolution brain mapping and virtual microscopy","volume":"35","author":"Mikula","year":"2007","journal-title":"NeuroImage"},{"key":"2023013112094876700_B4","doi-asserted-by":"crossref","first-page":"41","DOI":"10.1016\/j.jsb.2005.03.010","article-title":"Automated molecular microscopy: the new Leginon system","volume":"151","author":"Suloway","year":"2005","journal-title":"J. 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