{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,5]],"date-time":"2026-03-05T15:55:41Z","timestamp":1772726141875,"version":"3.50.1"},"reference-count":9,"publisher":"Oxford University Press (OUP)","issue":"16","license":[{"start":{"date-parts":[[2016,10,2]],"date-time":"2016-10-02T00:00:00Z","timestamp":1475366400000},"content-version":"vor","delay-in-days":2673,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/2.0\/uk\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2009,8,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary:ArrayExpress is one of the largest public repositories of microarray datasets. R\/Bioconductor provides a comprehensive suite of microarray analysis and integrative bioinformatics software. However, easy ways for importing datasets from ArrayExpress into R\/Bioconductor have been lacking. Here, we present such a tool that is suitable for both interactive and automated use.<\/jats:p>\n               <jats:p>Availability: The ArrayExpress package is available from the Bioconductor project at http:\/\/www.bioconductor.org. A users guide and examples are provided with the package.<\/jats:p>\n               <jats:p>Contact: \u00a0audrey@ebi.ac.uk<\/jats:p>\n               <jats:p>Supplementary information: \u00a0Supplementary data are available Bioinformatics online.<\/jats:p>","DOI":"10.1093\/bioinformatics\/btp354","type":"journal-article","created":{"date-parts":[[2009,6,9]],"date-time":"2009-06-09T00:27:15Z","timestamp":1244507235000},"page":"2092-2094","source":"Crossref","is-referenced-by-count":91,"title":["Importing ArrayExpress datasets into R\/Bioconductor"],"prefix":"10.1093","volume":"25","author":[{"given":"Audrey","family":"Kauffmann","sequence":"first","affiliation":[{"name":"1 EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD and 2Cambridge Institute for Medical Research, Addenbrooke's Hospital, Cambridge CB2 0XY, UK"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Tim F.","family":"Rayner","sequence":"additional","affiliation":[{"name":"1 EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD and 2Cambridge Institute for Medical Research, Addenbrooke's Hospital, Cambridge CB2 0XY, UK"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Helen","family":"Parkinson","sequence":"additional","affiliation":[{"name":"1 EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD and 2Cambridge Institute for Medical Research, Addenbrooke's Hospital, Cambridge CB2 0XY, UK"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Misha","family":"Kapushesky","sequence":"additional","affiliation":[{"name":"1 EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD and 2Cambridge Institute for Medical Research, Addenbrooke's Hospital, Cambridge CB2 0XY, UK"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Margus","family":"Lukk","sequence":"additional","affiliation":[{"name":"1 EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD and 2Cambridge Institute for Medical Research, Addenbrooke's Hospital, Cambridge CB2 0XY, UK"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Alvis","family":"Brazma","sequence":"additional","affiliation":[{"name":"1 EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD and 2Cambridge Institute for Medical Research, Addenbrooke's Hospital, Cambridge CB2 0XY, UK"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wolfgang","family":"Huber","sequence":"additional","affiliation":[{"name":"1 EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD and 2Cambridge Institute for Medical Research, Addenbrooke's Hospital, Cambridge CB2 0XY, UK"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2009,6,8]]},"reference":[{"key":"2023013112093780500_B1","doi-asserted-by":"crossref","first-page":"365","DOI":"10.1038\/ng1201-365","article-title":"Minimum information about a microarray experiment (MIAME) \u2013 toward standards for microarray data","volume":"29","author":"Brazma","year":"2001","journal-title":"Nat. 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