{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,9]],"date-time":"2026-01-09T12:26:13Z","timestamp":1767961573183,"version":"3.49.0"},"reference-count":8,"publisher":"Oxford University Press (OUP)","issue":"20","license":[{"start":{"date-parts":[[2016,10,2]],"date-time":"2016-10-02T00:00:00Z","timestamp":1475366400000},"content-version":"vor","delay-in-days":2648,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/2.0\/uk\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2009,10,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: FBA-SimVis is a VANTED plug-in for the constraint-based analysis of metabolic models with special focus on the visual exploration of metabolic flux data resulting from model analysis. The program provides a user-friendly environment for model reconstruction, constraint-based model analysis, and interactive visualization of the simulation results. With the ability to quantitatively analyse metabolic fluxes in an interactive and visual manner, FBA-SimVis supports a comprehensive understanding of constraint-based metabolic flux models in both overview and detail.<\/jats:p>\n               <jats:p>Availability: Software with manual and tutorials are freely available at http:\/\/fbasimvis.ipk-gatersleben.de\/<\/jats:p>\n               <jats:p>Contact: \u00a0grafahr@ipk-gatersleben.de<\/jats:p>\n               <jats:p>Supplementary information: Examples and supplementary data are available at http:\/\/fbasimvis.ipk-gatersleben.de\/<\/jats:p>","DOI":"10.1093\/bioinformatics\/btp408","type":"journal-article","created":{"date-parts":[[2009,7,4]],"date-time":"2009-07-04T00:24:32Z","timestamp":1246667072000},"page":"2755-2757","source":"Crossref","is-referenced-by-count":39,"title":["FBA-SimVis: interactive visualization of constraint-based metabolic models"],"prefix":"10.1093","volume":"25","author":[{"given":"Eva","family":"Grafahrend-Belau","sequence":"first","affiliation":[{"name":"1 Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben and 2Institute of Computer Science, Martin-Luther-University Halle-Wittenberg, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Christian","family":"Klukas","sequence":"additional","affiliation":[{"name":"1 Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben and 2Institute of Computer Science, Martin-Luther-University Halle-Wittenberg, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Bj\u00f6rn H.","family":"Junker","sequence":"additional","affiliation":[{"name":"1 Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben and 2Institute of Computer Science, Martin-Luther-University Halle-Wittenberg, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Falk","family":"Schreiber","sequence":"additional","affiliation":[{"name":"1 Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben and 2Institute of Computer Science, Martin-Luther-University Halle-Wittenberg, Germany"},{"name":"1 Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben and 2Institute of Computer Science, Martin-Luther-University Halle-Wittenberg, Germany"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2009,7,3]]},"reference":[{"key":"2023013112133024000_B1","doi-asserted-by":"crossref","first-page":"727","DOI":"10.1038\/nprot.2007.99","article-title":"Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox","volume":"2","author":"Becker","year":"2007","journal-title":"Nature Protocols"},{"key":"2023013112133024000_B2","doi-asserted-by":"crossref","first-page":"109.1","DOI":"10.1186\/1471-2105-7-109","article-title":"VANTED: a system for advanced data analysis and visualisation in the context of biological networks","volume":"7","author":"Junker","year":"2006","journal-title":"BMC Bioinformatics"},{"key":"2023013112133024000_B3","doi-asserted-by":"crossref","first-page":"491","DOI":"10.1016\/j.copbio.2003.08.001","article-title":"Advances in flux balance analysis","volume":"14","author":"Kauffman","year":"2003","journal-title":"Curr. 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