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Unlike previous microarray meta-analysis packages, metahdep accounts for both sampling and hierarchical dependence among studies, as well as fundamental covariate differences between studies.<\/jats:p>\n               <jats:p>Availability: \u00a0http:\/\/bioconductor.org\/packages\/release\/Software.html<\/jats:p>\n               <jats:p>Contact: \u00a0john.r.stevens@usu.edu<\/jats:p>","DOI":"10.1093\/bioinformatics\/btp468","type":"journal-article","created":{"date-parts":[[2009,8,1]],"date-time":"2009-08-01T00:14:58Z","timestamp":1249085698000},"page":"2619-2620","source":"Crossref","is-referenced-by-count":13,"title":["<i>metahdep<\/i>: meta-analysis of hierarchically dependent gene expression studies"],"prefix":"10.1093","volume":"25","author":[{"given":"John R.","family":"Stevens","sequence":"first","affiliation":[{"name":"1 Department of Mathematics and Statistics, Utah State University, Logan, UT 84322-3900 and 2Department of Biostatistics and Medical Informatics, University of Wisconsin, Madison, WI 53792-4675, USA"}]},{"given":"Gabriel","family":"Nicholas","sequence":"additional","affiliation":[{"name":"1 Department of Mathematics and Statistics, Utah State University, Logan, UT 84322-3900 and 2Department of Biostatistics and Medical Informatics, University of Wisconsin, Madison, WI 53792-4675, USA"}]}],"member":"286","published-online":{"date-parts":[[2009,7,30]]},"reference":[{"key":"2023013112122424700_B1","doi-asserted-by":"crossref","first-page":"95","DOI":"10.1016\/S0165-5728(02)00366-1","article-title":"Genomic scale profiling of autoimmune inflammation in the central nervous system: the nervous response to inflammation","volume":"133","author":"Carmody","year":"2002","journal-title":"J. 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