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Herein, we present PoreLogo, an automatic tool for analysing, visualizing and comparing the amino acid composition of transmembrane channels and its conservation across the corresponding protein family.<\/jats:p>\n               <jats:p>Availability: PoreLogo is accessible as a public web server at http:\/\/www.ebi.ac.uk\/thornton-srv\/software\/PoreLogo\/.<\/jats:p>\n               <jats:p>Contacts: \u00a0marial@ebi.ac.uk; romina.oliva@uniparthenope.it.<\/jats:p>","DOI":"10.1093\/bioinformatics\/btp545","type":"journal-article","created":{"date-parts":[[2009,9,18]],"date-time":"2009-09-18T03:59:51Z","timestamp":1253246391000},"page":"3183-3184","source":"Crossref","is-referenced-by-count":10,"title":["PoreLogo: a new tool to analyse, visualize and compare channels in transmembrane proteins"],"prefix":"10.1093","volume":"25","author":[{"given":"Romina","family":"Oliva","sequence":"first","affiliation":[{"name":"1 Department of Applied Sciences, University of \u2018Parthenope\u2019 of Naples, Centro Direzionale Isola C4 80143, Naples, Italy and 2 EMBL\/EBI, The Wellcome Trust Genome Campus, CB10 1SD, Hinxton, Cambridge, UK"},{"name":"1 Department of Applied Sciences, University of \u2018Parthenope\u2019 of Naples, Centro Direzionale Isola C4 80143, Naples, Italy and 2 EMBL\/EBI, The Wellcome Trust Genome Campus, CB10 1SD, Hinxton, Cambridge, UK"}]},{"given":"Janet M.","family":"Thornton","sequence":"additional","affiliation":[{"name":"1 Department of Applied Sciences, University of \u2018Parthenope\u2019 of Naples, Centro Direzionale Isola C4 80143, Naples, Italy and 2 EMBL\/EBI, The Wellcome Trust Genome Campus, CB10 1SD, Hinxton, Cambridge, UK"}]},{"given":"Marialuisa","family":"Pellegrini-Calace","sequence":"additional","affiliation":[{"name":"1 Department of Applied Sciences, University of \u2018Parthenope\u2019 of Naples, Centro Direzionale Isola C4 80143, Naples, Italy and 2 EMBL\/EBI, The Wellcome Trust Genome Campus, CB10 1SD, Hinxton, Cambridge, UK"}]}],"member":"286","published-online":{"date-parts":[[2009,9,17]]},"reference":[{"key":"2023013112190903000_B1","doi-asserted-by":"crossref","first-page":"403","DOI":"10.1016\/S0022-2836(05)80360-2","article-title":"Basic local alignment search tool","volume":"215","author":"Altschul","year":"1990","journal-title":"J. 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