{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2023,2,17]],"date-time":"2023-02-17T23:30:14Z","timestamp":1676676614848},"reference-count":9,"publisher":"Oxford University Press (OUP)","issue":"1","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2010,1,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: When referring to genes, authors often use synonyms instead of the official gene symbols. In order to accurately retrieve as many relevant documents as possible, we have developed GeneE, a web application that expands a gene query to include all known synonyms, and adds disambiguation information for ambiguous terms, before forwarding the query to either PubMed, Google or Jane. The query expansion algorithm is also available as a web service.<\/jats:p>\n               <jats:p>Availability: \u00a0http:\/\/biosemantics.org\/geneE<\/jats:p>\n               <jats:p>Contact: \u00a0m.schuemie@erasmusmc.nl<\/jats:p>","DOI":"10.1093\/bioinformatics\/btp597","type":"journal-article","created":{"date-parts":[[2009,10,17]],"date-time":"2009-10-17T00:34:09Z","timestamp":1255739649000},"page":"147-148","source":"Crossref","is-referenced-by-count":4,"title":["GeneE: Gene and protein query expansion with disambiguation"],"prefix":"10.1093","volume":"26","author":[{"given":"Martijn J.","family":"Schuemie","sequence":"first","affiliation":[{"name":"1 Department of Medical Informatics, Erasmus University Medical Center Rotterdam, P.O. Box 2040, 3000 CA, Rotterdam and 2 Nijmegen Centre for Molecular and Biomolecular Informatics, Radboud University Nijmegen Medical Center, Geert Grooteplein 28, 6525 GA, Nijmegen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ning","family":"Kang","sequence":"additional","affiliation":[{"name":"1 Department of Medical Informatics, Erasmus University Medical Center Rotterdam, P.O. Box 2040, 3000 CA, Rotterdam and 2 Nijmegen Centre for Molecular and Biomolecular Informatics, Radboud University Nijmegen Medical Center, Geert Grooteplein 28, 6525 GA, Nijmegen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Maarten L.","family":"Hekkelman","sequence":"additional","affiliation":[{"name":"1 Department of Medical Informatics, Erasmus University Medical Center Rotterdam, P.O. Box 2040, 3000 CA, Rotterdam and 2 Nijmegen Centre for Molecular and Biomolecular Informatics, Radboud University Nijmegen Medical Center, Geert Grooteplein 28, 6525 GA, Nijmegen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jan A.","family":"Kors","sequence":"additional","affiliation":[{"name":"1 Department of Medical Informatics, Erasmus University Medical Center Rotterdam, P.O. Box 2040, 3000 CA, Rotterdam and 2 Nijmegen Centre for Molecular and Biomolecular Informatics, Radboud University Nijmegen Medical Center, Geert Grooteplein 28, 6525 GA, Nijmegen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2009,10,16]]},"reference":[{"key":"2023012507531305800_B1","doi-asserted-by":"crossref","first-page":"D445","DOI":"10.1093\/nar\/gkm881","article-title":"The HGNC Database in 2008: a resource for the human genome","volume":"36","author":"Bruford","year":"2008","journal-title":"Nucleic Acids Res"},{"key":"2023012507531305800_B2","doi-asserted-by":"crossref","first-page":"248","DOI":"10.1093\/bioinformatics\/bth496","article-title":"Gene name ambiguity of eukaryotic nomenclatures","volume":"21","author":"Chen","year":"2005","journal-title":"Bioinformatics"},{"key":"2023012507531305800_B3","volume-title":"Lucene in Action.","author":"Gospodnetic","year":"2005"},{"key":"2023012507531305800_B4","doi-asserted-by":"crossref","first-page":"51","DOI":"10.1007\/s10791-008-9075-7","article-title":"An empirical study of gene synonym query expansion in biomedical information retrieval","volume":"12","author":"Lu","year":"2009","journal-title":"Inf. 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