{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,8,4]],"date-time":"2024-08-04T02:36:26Z","timestamp":1722738986582},"reference-count":7,"publisher":"Oxford University Press (OUP)","issue":"7","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2011,4,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: Gobe is a web-based tool for viewing comparative genomic data. It supports viewing multiple genomic regions simultaneously. Its simple text format and flash-based rendering make it an interactive, exploratory research tool. Gobe can be used without installation through our web service, or downloaded and customized with stylesheets and javascript callback functions.<\/jats:p>\n               <jats:p>Availability: Gobe is a flash application that runs in all modern web-browsers. The full source-code, including that for the online web application is available under the MIT license at: http:\/\/github.com\/brentp\/gobe. Sample applications are hosted at http:\/\/try-gobe.appspot.com\/ and http:\/\/synteny.cnr.berkeley.edu\/gobe-app\/.<\/jats:p>\n               <jats:p>Contact: \u00a0bpederse@berkeley.edu<\/jats:p>","DOI":"10.1093\/bioinformatics\/btr056","type":"journal-article","created":{"date-parts":[[2011,2,5]],"date-time":"2011-02-05T01:12:51Z","timestamp":1296868371000},"page":"1015-1016","source":"Crossref","is-referenced-by-count":5,"title":["Gobe: an interactive, web-based tool for comparative genomic visualization"],"prefix":"10.1093","volume":"27","author":[{"given":"Brent S.","family":"Pedersen","sequence":"first","affiliation":[{"name":"Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Haibao","family":"Tang","sequence":"additional","affiliation":[{"name":"Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Michael","family":"Freeling","sequence":"additional","affiliation":[{"name":"Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2011,2,3]]},"reference":[{"key":"2023012512164757100_B1","doi-asserted-by":"crossref","first-page":"3389","DOI":"10.1093\/nar\/25.17.3389","article-title":"Gapped BLAST and PSI-BLAST: a new generation of protein database search programs","volume":"25","author":"Altschul","year":"1997","journal-title":"Nucleic Acids Res."},{"key":"2023012512164757100_B2","doi-asserted-by":"crossref","first-page":"2","DOI":"10.1186\/1471-2105-10-2","article-title":"GenomeGraphs: integrated genomic data visualization with R","volume":"10","author":"Durinck","year":"2009","journal-title":"BMC Bioinformatics"},{"key":"2023012512164757100_B3","doi-asserted-by":"crossref","first-page":"W273","DOI":"10.1093\/nar\/gkh458","article-title":"VISTA: computational tools for comparative genomics","volume":"32","author":"Frazer","year":"2004","journal-title":"Nucleic Acids Res."},{"key":"2023012512164757100_B4","doi-asserted-by":"crossref","first-page":"2334","DOI":"10.1093\/bioinformatics\/btq413","article-title":"genoPlotR: comparative gene and genome visualization in R","volume":"26","author":"Guy","year":"2010","journal-title":"Bioinformatics"},{"key":"2023012512164757100_B5","doi-asserted-by":"crossref","first-page":"996","DOI":"10.1101\/gr.229102","article-title":"The Human Genome Browser at UCSC","volume":"6","author":"Kent","year":"2002","journal-title":"Genome Res."},{"key":"2023012512164757100_B6","doi-asserted-by":"crossref","first-page":"401","DOI":"10.1093\/bioinformatics\/btp666","article-title":"Tablet\u2014next generation sequence assembly visualization","volume":"26","author":"Milne","year":"2009","journal-title":"Bioinformatics"},{"key":"2023012512164757100_B7","doi-asserted-by":"crossref","first-page":"1599","DOI":"10.1101\/gr.403602","article-title":"The generic genome browser: a building block for a model organism system database","volume":"12","author":"Stein","year":"2002","journal-title":"Genome Res."}],"container-title":["Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/27\/7\/1015\/48869195\/bioinformatics_27_7_1015.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/27\/7\/1015\/48869195\/bioinformatics_27_7_1015.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,1,25]],"date-time":"2023-01-25T14:41:39Z","timestamp":1674657699000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article\/27\/7\/1015\/232075"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2011,2,3]]},"references-count":7,"journal-issue":{"issue":"7","published-print":{"date-parts":[[2011,4,1]]}},"URL":"https:\/\/doi.org\/10.1093\/bioinformatics\/btr056","relation":{},"ISSN":["1367-4811","1367-4803"],"issn-type":[{"value":"1367-4811","type":"electronic"},{"value":"1367-4803","type":"print"}],"subject":[],"published-other":{"date-parts":[[2011,4,1]]},"published":{"date-parts":[[2011,2,3]]}}}