{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,9]],"date-time":"2026-01-09T12:32:36Z","timestamp":1767961956989,"version":"3.49.0"},"reference-count":10,"publisher":"Oxford University Press (OUP)","issue":"7","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2011,4,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: The Biological General Repository for Interaction Datasets (BioGRID) representational state transfer (REST) service allows full URL-based access to curated protein and genetic interaction data at the BioGRID database. Appending URL parameters allows filtering of data by various attributes including gene names and identifiers, PubMed ID and evidence type. We also describe two visualization tools that interface with the REST service, the BiogridPlugin2 for Cytoscape and the BioGRID WebGraph.<\/jats:p>\n               <jats:p>Availability and implementation: BioGRID data and applications are completely free for commercial and non-commercial use. http:\/\/webservice.thebiogrid.org\/resources\/interactions (REST Service), http:\/\/wiki.thebiogrid.org\/doku.php\/biogridrest(REST Service parameter list and help), http:\/\/webservice.thebiogrid.org\/resources\/application.wadl(REST Service WADL), http:\/\/thebiogrid.org\/download.php (BiogridPlugin2, v2.1 download), http:\/\/wiki.thebiogrid.org\/doku.php\/biogridplugin2 (BiogridPlugin2 help) and http:\/\/tyerslab.bio.ed.ac.uk\/tools\/BioGRID_webgraph.php(BioGRID WebGraph).<\/jats:p>\n               <jats:p>Contact: \u00a0andrew.winter@ed.ac.uk, m.tyers@ed.ac.uk<\/jats:p>\n               <jats:p>Supplementary information: \u00a0Supplementary data are available at Bioinformatics online.<\/jats:p>","DOI":"10.1093\/bioinformatics\/btr062","type":"journal-article","created":{"date-parts":[[2011,2,8]],"date-time":"2011-02-08T05:06:38Z","timestamp":1297141598000},"page":"1043-1044","source":"Crossref","is-referenced-by-count":25,"title":["BioGRID REST Service, BiogridPlugin2 and BioGRID WebGraph: new tools for access to interaction data at BioGRID"],"prefix":"10.1093","volume":"27","author":[{"given":"Andrew G.","family":"Winter","sequence":"first","affiliation":[{"name":"Wellcome Trust Centre for Cell Biology and School of Biological Sciences, The University of Edinburgh, Edinburgh, EH9 3JR, UK"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jan","family":"Wildenhain","sequence":"additional","affiliation":[{"name":"Wellcome Trust Centre for Cell Biology and School of Biological Sciences, The University of Edinburgh, Edinburgh, EH9 3JR, UK"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mike","family":"Tyers","sequence":"additional","affiliation":[{"name":"Wellcome Trust Centre for Cell Biology and School of Biological Sciences, The University of Edinburgh, Edinburgh, EH9 3JR, UK"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2011,2,7]]},"reference":[{"key":"2023012512164649300_B1","doi-asserted-by":"crossref","first-page":"D525","DOI":"10.1093\/nar\/gkp878","article-title":"The IntAct molecular interaction database in 2010","volume":"38","author":"Aranda","year":"2010","journal-title":"Nucleic Acids Res."},{"key":"2023012512164649300_B2","doi-asserted-by":"crossref","first-page":"R22","DOI":"10.1186\/gb-2003-4-3-r22","article-title":"Osprey: a network visualization system","volume":"4","author":"Breitkreutz","year":"2003","journal-title":"Genome Biol."},{"key":"2023012512164649300_B3","doi-asserted-by":"crossref","first-page":"D637","DOI":"10.1093\/nar\/gkm1001","article-title":"The BioGRID Interaction Database: 2008 update","volume":"36","author":"Breitkreutz","year":"2008","journal-title":"Nucleic Acids Res."},{"key":"2023012512164649300_B4","doi-asserted-by":"crossref","first-page":"D532","DOI":"10.1093\/nar\/gkp983","article-title":"MINT, the molecular interaction database: 2009 update","volume":"38","author":"Ceol","year":"2010","journal-title":"Nucleic Acids Res."},{"key":"2023012512164649300_B5","doi-asserted-by":"crossref","first-page":"D433","DOI":"10.1093\/nar\/gkp917","article-title":"Saccharomyces Genome Database provides mutant phenotype data","volume":"38","author":"Engel","year":"2010","journal-title":"Nucleic Acids Res."},{"key":"2023012512164649300_B6","doi-asserted-by":"crossref","first-page":"44","DOI":"10.1186\/1741-7007-5-44","article-title":"Broadening the horizon\u2013level 2.5 of the HUPO-PSI format for molecular interactions","volume":"5","author":"Kerrien","year":"2007","journal-title":"BMC Biol."},{"key":"2023012512164649300_B7","doi-asserted-by":"crossref","first-page":"1895","DOI":"10.1002\/pmic.201090034","article-title":"Implementing data standards: a report on the HUPOPSI workshop September 2009, Toronto, Canada","volume":"10","author":"Orchard","year":"2009","journal-title":"Proteomics"},{"key":"2023012512164649300_B8","doi-asserted-by":"crossref","first-page":"11","DOI":"10.1186\/jbiol36","article-title":"Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae","volume":"5","author":"Reguly","year":"2006","journal-title":"J. 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