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On a 16-node Hadoop cluster, it is capable of processing about 13 GB per hour in map+rmdup mode, while reaching a throughput of 19 GB per hour in mapping-only mode.<\/jats:p>\n               <jats:p>Availability: SEAL is available online at http:\/\/biodoop-seal.sourceforge.net\/.<\/jats:p>\n               <jats:p>Contact: \u00a0luca.pireddu@crs4.it<\/jats:p>","DOI":"10.1093\/bioinformatics\/btr325","type":"journal-article","created":{"date-parts":[[2011,6,23]],"date-time":"2011-06-23T00:58:29Z","timestamp":1308790709000},"page":"2159-2160","source":"Crossref","is-referenced-by-count":108,"title":["SEAL: a distributed short read mapping and duplicate removal tool"],"prefix":"10.1093","volume":"27","author":[{"given":"Luca","family":"Pireddu","sequence":"first","affiliation":[{"name":"CRS4, Polaris, Ed. 1, I-09010 Pula, Italy"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Simone","family":"Leo","sequence":"additional","affiliation":[{"name":"CRS4, Polaris, Ed. 1, I-09010 Pula, Italy"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Gianluigi","family":"Zanetti","sequence":"additional","affiliation":[{"name":"CRS4, Polaris, Ed. 1, I-09010 Pula, Italy"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2011,6,22]]},"reference":[{"key":"2023012511532512500_B1","article-title":"MapReduce: simplified data processing on large clusters","volume-title":"OSDI '04: 6th Symposium on Operating Systems Design and Impl.","author":"Dean","year":"2004"},{"key":"2023012511532512500_B2","doi-asserted-by":"crossref","first-page":"1061","DOI":"10.1038\/nature09534","article-title":"A map of human genome variation from population-scale sequencing","volume":"467","author":"Durbin","year":"2010","journal-title":"Nature"},{"issue":"Suppl. 1","key":"2023012511532512500_B3","first-page":"D876","article-title":"The UCSC Genome Browser database: update 2011","volume":"39","author":"Fujita","year":"2010","journal-title":"Nucleic Acids Res."},{"key":"2023012511532512500_B4","article-title":"Sequencing Analysis Software User Guide For Pipeline Version 1.4 and CASAVA Version 1.0","volume-title":"Illumina","author":"Illumina, Inc.","year":"2009"},{"key":"2023012511532512500_B5","doi-asserted-by":"crossref","first-page":"291","DOI":"10.1038\/nmeth.1311","article-title":"Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes","volume":"6","author":"Kozarewa","year":"2009","journal-title":"Nat. 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