{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2023,1,28]],"date-time":"2023-01-28T05:22:19Z","timestamp":1674883339742},"reference-count":11,"publisher":"Oxford University Press (OUP)","issue":"14","license":[{"start":{"date-parts":[[2016,10,2]],"date-time":"2016-10-02T00:00:00Z","timestamp":1475366400000},"content-version":"vor","delay-in-days":1949,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/2.5"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2011,7,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: LinkinPath is a pathway mapping and analysis tool that enables users to explore and visualize the list of gene\/protein sequences through various Flash-driven interactive web interfaces including KEGG pathway maps, functional composition maps (TreeMaps), molecular interaction\/reaction networks and pathway-to-pathway networks. Users can submit single or multiple datasets of gene\/protein sequences to LinkinPath to (i) determine the co-occurrence and co-absence of genes\/proteins on animated KEGG pathway maps; (ii) compare functional compositions within and among the datasets using TreeMaps; (iii) analyze the statistically enriched pathways across the datasets; (iv) build the pathway-to-pathway networks for each dataset; (v) explore potential interaction\/reaction paths between pathways; and (vi) identify common pathway-to-pathway networks across the datasets.<\/jats:p>\n               <jats:p>Availability: LinkinPath is freely available to all interested users at http:\/\/www.biotec.or.th\/isl\/linkinpath\/.<\/jats:p>\n               <jats:p>Contact: \u00a0supawadee@biotec.or.th<\/jats:p>\n               <jats:p>Supplementary information: \u00a0Supplementary data are available at Bioinformatics online.<\/jats:p>","DOI":"10.1093\/bioinformatics\/btr328","type":"journal-article","created":{"date-parts":[[2011,6,3]],"date-time":"2011-06-03T11:53:17Z","timestamp":1307101997000},"page":"2015-2017","source":"Crossref","is-referenced-by-count":1,"title":["LinkinPath: from sequence to interconnected pathway"],"prefix":"10.1093","volume":"27","author":[{"given":"Supawadee","family":"Ingsriswang","sequence":"first","affiliation":[]},{"given":"Sunai","family":"Yokwai","sequence":"additional","affiliation":[]},{"given":"Duangdao","family":"Wichadakul","sequence":"additional","affiliation":[]}],"member":"286","published-online":{"date-parts":[[2011,6,2]]},"reference":[{"key":"2023012712445116700_B1","doi-asserted-by":"crossref","first-page":"403","DOI":"10.1016\/S0022-2836(05)80360-2","article-title":"Basic local alignment search tool","volume":"215","author":"Altschul","year":"1990","journal-title":"J. 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