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It includes detection of outliers and biases, inefficient immuno-precipitation and overamplification artifacts, de novo identification of read-rich genomic regions and visualization of the location and coverage of genomic region lists.<\/jats:p>\n               <jats:p>Availability: \u00a0www.bioconductor.org<\/jats:p>\n               <jats:p>Contact: \u00a0david.rossell@irbbarcelona.org<\/jats:p>\n               <jats:p>Supplementary information: \u00a0Supplementary data available at Bioinformatics online.<\/jats:p>","DOI":"10.1093\/bioinformatics\/btr700","type":"journal-article","created":{"date-parts":[[2011,12,24]],"date-time":"2011-12-24T02:37:52Z","timestamp":1324694272000},"page":"589-590","source":"Crossref","is-referenced-by-count":53,"title":["<tt>htSeqTools<\/tt>: high-throughput sequencing quality control, processing and visualization in R"],"prefix":"10.1093","volume":"28","author":[{"given":"Evarist","family":"Planet","sequence":"first","affiliation":[{"name":"1 Biostatistics and Bioinformatics Unit, Institute for Research in Biomedicine of Barcelona, Barcelona and 2IRB-BSC Joint Research Program on Computational Biology, IRB Barcelona, Barcelona, Spain"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Camille Stephan-Otto","family":"Attolini","sequence":"additional","affiliation":[{"name":"1 Biostatistics and Bioinformatics Unit, Institute for Research in Biomedicine of Barcelona, Barcelona and 2IRB-BSC Joint Research Program on Computational Biology, IRB Barcelona, Barcelona, Spain"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Oscar","family":"Reina","sequence":"additional","affiliation":[{"name":"1 Biostatistics and Bioinformatics Unit, Institute for Research in Biomedicine of Barcelona, Barcelona and 2IRB-BSC Joint Research Program on Computational Biology, IRB Barcelona, Barcelona, Spain"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Oscar","family":"Flores","sequence":"additional","affiliation":[{"name":"1 Biostatistics and Bioinformatics Unit, Institute for Research in Biomedicine of Barcelona, Barcelona and 2IRB-BSC Joint Research Program on Computational Biology, IRB Barcelona, Barcelona, Spain"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"David","family":"Rossell","sequence":"additional","affiliation":[{"name":"1 Biostatistics and Bioinformatics Unit, Institute for Research in Biomedicine of Barcelona, Barcelona and 2IRB-BSC Joint Research Program on Computational Biology, IRB Barcelona, Barcelona, Spain"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2011,12,22]]},"reference":[{"key":"2023012512192149000_B1","doi-asserted-by":"crossref","first-page":"1151","DOI":"10.1198\/016214501753382129","article-title":"Empirical Bayes analysis of a microarray experiment","volume":"96","author":"Efron","year":"2001","journal-title":"JASA"},{"key":"2023012512192149000_B2","doi-asserted-by":"crossref","first-page":"R80","DOI":"10.1186\/gb-2004-5-10-r80","article-title":"Bioconductor: Open software development for computational biology and bioinformatics","volume":"5","author":"Gentleman","year":"2004","journal-title":"Genome Biol."},{"key":"2023012512192149000_B3","volume-title":"Variabilita e Mutabilita.","author":"Gini","year":"1912"},{"key":"2023012512192149000_B4","doi-asserted-by":"crossref","first-page":"461","DOI":"10.1214\/aos\/1176344136","article-title":"Estimating the dimension of a model","volume":"6","author":"Schwarz","year":"1978","journal-title":"Ann. 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