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Classifying the read mixture to separate the two allows for more precise analysis to be performed.<\/jats:p>\n               <jats:p>Results: We present a technique, with an associated tool Xenome, which performs fast, accurate and specific classification of xenograft-derived sequence read data. We have evaluated it on RNA-Seq data from human, mouse and human-in-mouse xenograft datasets.<\/jats:p>\n               <jats:p>Availability: \u00a0Xenome is available for non-commercial use from http:\/\/www.nicta.com.au\/bioinformatics<\/jats:p>\n               <jats:p>Contact: \u00a0tom.conway@nicta.com.au<\/jats:p>","DOI":"10.1093\/bioinformatics\/bts236","type":"journal-article","created":{"date-parts":[[2012,6,11]],"date-time":"2012-06-11T14:09:18Z","timestamp":1339423758000},"page":"i172-i178","source":"Crossref","is-referenced-by-count":264,"title":["Xenome\u2014a tool for classifying reads from xenograft samples"],"prefix":"10.1093","volume":"28","author":[{"given":"Thomas","family":"Conway","sequence":"first","affiliation":[{"name":"1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jeremy","family":"Wazny","sequence":"additional","affiliation":[{"name":"1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andrew","family":"Bromage","sequence":"additional","affiliation":[{"name":"1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Martin","family":"Tymms","sequence":"additional","affiliation":[{"name":"1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Dhanya","family":"Sooraj","sequence":"additional","affiliation":[{"name":"1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Elizabeth D.","family":"Williams","sequence":"additional","affiliation":[{"name":"1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Bryan","family":"Beresford-Smith","sequence":"additional","affiliation":[{"name":"1 NICTA Victoria Research Laboratory, Department of Computer Science and Software Engineering, The University of Melbourne, Parkville and 2Monash Institute of Medical Research, Monash University, Clayton, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2012,6,9]]},"reference":[{"key":"2023012512330472900_B1","doi-asserted-by":"crossref","first-page":"787","DOI":"10.1109\/FOCS.2010.80","article-title":"Backyard cuckoo hashing: Constant worst-case operations with a succinct representation","volume-title":"2010 IEEE 51st Annual Symposium on Foundations of Computer Science","author":"Arbitman","year":"2010"},{"key":"2023012512330472900_B2","doi-asserted-by":"crossref","first-page":"e1002111","DOI":"10.1371\/journal.pcbi.1002111","article-title":"Discovering transcription factor binding sites in highly repetitive regions of genomes with multi-read analysis of ChIP-Seq data","volume":"7","author":"Chung","year":"2011","journal-title":"PLoS Comput. 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