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The new version has yielded significant improvements in sensitivity over the previous one.<\/jats:p><jats:p>Availability: Freely available for academic use at http:\/\/pcarvalho.com\/patternlab.<\/jats:p><jats:p>Contact: \u00a0paulo@pcarvalho.com<\/jats:p>","DOI":"10.1093\/bioinformatics\/bts247","type":"journal-article","created":{"date-parts":[[2012,4,27]],"date-time":"2012-04-27T01:38:05Z","timestamp":1335490685000},"page":"1652-1654","source":"Crossref","is-referenced-by-count":75,"title":["Improving the TFold test for differential shotgun proteomics"],"prefix":"10.1093","volume":"28","author":[{"given":"Paulo C.","family":"Carvalho","sequence":"first","affiliation":[{"name":"1 Carlos Chagas Institute, Fiocruz, Paran\u00e1, Brazil, 2Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California, USA 2, 92037 and 3Systems Engineering and Computer Science Program, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil"}]},{"suffix":"III","given":"John R.","family":"Yates","sequence":"additional","affiliation":[{"name":"1 Carlos Chagas Institute, Fiocruz, Paran\u00e1, Brazil, 2Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California, USA 2, 92037 and 3Systems Engineering and Computer Science Program, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil"}]},{"given":"Valmir C.","family":"Barbosa","sequence":"additional","affiliation":[{"name":"1 Carlos Chagas Institute, Fiocruz, Paran\u00e1, Brazil, 2Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California, USA 2, 92037 and 3Systems Engineering and Computer Science Program, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil"}]}],"member":"286","published-online":{"date-parts":[[2012,4,26]]},"reference":[{"key":"2023012512340580800_B1","doi-asserted-by":"crossref","first-page":"289","DOI":"10.1111\/j.2517-6161.1995.tb02031.x","article-title":"Controlling the false discovery rate: a practical and powerful approach to multiple testing","volume":"57","author":"Benjamini","year":"1995","journal-title":"J. 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