{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,17]],"date-time":"2026-04-17T12:51:28Z","timestamp":1776430288147,"version":"3.51.2"},"reference-count":16,"publisher":"Oxford University Press (OUP)","issue":"14","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2013,7,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: The reliable detection of RNA editing sites from massive sequencing data remains challenging and, although several methodologies have been proposed, no computational tools have been released to date. Here, we introduce REDItools a suite of python scripts to perform high-throughput investigation of RNA editing using next-generation sequencing data.<\/jats:p>\n               <jats:p>Availability and implementation: REDItools are in python programming language and freely available at http:\/\/code.google.com\/p\/reditools\/.<\/jats:p>\n               <jats:p>Contact: \u00a0ernesto.picardi@uniba.it or graziano.pesole@uniba.it<\/jats:p>\n               <jats:p>Supplementary information: \u00a0Supplementary data are available at Bioinformatics online.<\/jats:p>","DOI":"10.1093\/bioinformatics\/btt287","type":"journal-article","created":{"date-parts":[[2013,6,7]],"date-time":"2013-06-07T01:00:10Z","timestamp":1370566810000},"page":"1813-1814","source":"Crossref","is-referenced-by-count":331,"title":["REDItools: high-throughput RNA editing detection made easy"],"prefix":"10.1093","volume":"29","author":[{"given":"Ernesto","family":"Picardi","sequence":"first","affiliation":[{"name":"1 Department of Biosciences, Biotechnology and Biopharmaceutics, University of Bari, 2Institute of Biomembranes and Bioenergetics, National Research Council and 3Center of Excellence in Comparative Genomics, University of Bari, 70125 Bari, Italy"},{"name":"1 Department of Biosciences, Biotechnology and Biopharmaceutics, University of Bari, 2Institute of Biomembranes and Bioenergetics, National Research Council and 3Center of Excellence in Comparative Genomics, University of Bari, 70125 Bari, Italy"}]},{"given":"Graziano","family":"Pesole","sequence":"additional","affiliation":[{"name":"1 Department of Biosciences, Biotechnology and Biopharmaceutics, University of Bari, 2Institute of Biomembranes and Bioenergetics, National Research Council and 3Center of Excellence in Comparative Genomics, University of Bari, 70125 Bari, Italy"},{"name":"1 Department of Biosciences, Biotechnology and Biopharmaceutics, University of Bari, 2Institute of Biomembranes and Bioenergetics, National Research Council and 3Center of Excellence in Comparative Genomics, University of Bari, 70125 Bari, Italy"},{"name":"1 Department of Biosciences, Biotechnology and Biopharmaceutics, University of Bari, 2Institute of Biomembranes and Bioenergetics, National Research Council and 3Center of Excellence in Comparative Genomics, University of Bari, 70125 Bari, Italy"}]}],"member":"286","published-online":{"date-parts":[[2013,6,5]]},"reference":[{"key":"2023012810454027300_btt287-B1","doi-asserted-by":"crossref","first-page":"1207","DOI":"10.1038\/nbt.2452","article-title":"The difficult calls in RNA editing","volume":"30","author":"Bass","year":"2012","journal-title":"Nat. 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