{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,25]],"date-time":"2026-03-25T14:50:11Z","timestamp":1774450211648,"version":"3.50.1"},"reference-count":8,"publisher":"Oxford University Press (OUP)","issue":"1","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2014,1,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: BooleSim (Boolean network simulator) is an open-source in-browser tool for simulation and manipulation of Boolean networks. It was developed mainly during Google\u2019s Summer of Code 2012 and uses the biographer project for network visualization. It can be used specifically for the modeling of gene regulatory or signal transduction networks.<\/jats:p>\n               <jats:p>Availability and implementation: BooleSim is free software and can be downloaded from GitHub (https:\/\/github.com\/matthiasbock\/BooleSim). Online version available at http:\/\/rumo.biologie.hu-berlin.de\/boolesim\/.<\/jats:p>\n               <jats:p>Contact: \u00a0edda.klipp@rz.hu-berlin.de<\/jats:p>","DOI":"10.1093\/bioinformatics\/btt568","type":"journal-article","created":{"date-parts":[[2013,9,30]],"date-time":"2013-09-30T00:08:14Z","timestamp":1380499694000},"page":"131-132","source":"Crossref","is-referenced-by-count":24,"title":["BooleSim: an interactive Boolean network simulator"],"prefix":"10.1093","volume":"30","author":[{"given":"Matthias","family":"Bock","sequence":"first","affiliation":[{"name":"1 Department of Biology, Theoretical Biophysics, Humboldt-Universit\u00e4t zu Berlin, 10115 Berlin, Germany and 2Chemical Engineering Department, Indian Institute of Technology Bombay, Mumbai 400 076, India"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Till","family":"Scharp","sequence":"additional","affiliation":[{"name":"1 Department of Biology, Theoretical Biophysics, Humboldt-Universit\u00e4t zu Berlin, 10115 Berlin, Germany and 2Chemical Engineering Department, Indian Institute of Technology Bombay, Mumbai 400 076, India"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Chaitanya","family":"Talnikar","sequence":"additional","affiliation":[{"name":"1 Department of Biology, Theoretical Biophysics, Humboldt-Universit\u00e4t zu Berlin, 10115 Berlin, Germany and 2Chemical Engineering Department, Indian Institute of Technology Bombay, Mumbai 400 076, India"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Edda","family":"Klipp","sequence":"additional","affiliation":[{"name":"1 Department of Biology, Theoretical Biophysics, Humboldt-Universit\u00e4t zu Berlin, 10115 Berlin, Germany and 2Chemical Engineering Department, Indian Institute of Technology Bombay, Mumbai 400 076, India"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2013,9,29]]},"reference":[{"key":"2023012710375835800_btt568-B1","doi-asserted-by":"crossref","first-page":"16","DOI":"10.1186\/1751-0473-3-16","article-title":"Boolean network simulations for life scientists","volume":"3","author":"Albert","year":"2008","journal-title":"Source Code Biol. 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