{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2023,9,7]],"date-time":"2023-09-07T18:51:45Z","timestamp":1694112705693},"reference-count":8,"publisher":"Oxford University Press (OUP)","issue":"18","license":[{"start":{"date-parts":[[2016,11,14]],"date-time":"2016-11-14T00:00:00Z","timestamp":1479081600000},"content-version":"vor","delay-in-days":908,"URL":"http:\/\/creativecommons.org\/licenses\/by\/3.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2014,9,15]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:p>Motivation: \u2003Visualization and analysis of large numbers of biological images has generated a bottle neck in research. We present HTML5 PivotViewer, a novel, open source, platform-independent viewer making use of the latest web technologies that allows seamless access to images and associated metadata for each image. This provides a powerful method to allow end users to mine their data.<\/jats:p><jats:p>Availability and implementation: \u2003Documentation, examples and links to the software are available from http:\/\/www.cbrg.ox.ac.uk\/data\/pivotviewer\/ . The software is licensed under GPLv2.<\/jats:p><jats:p>Contact: \u2003 stephen.taylor@imm.ox.ac.uk and roger@coritsu.com<\/jats:p>","DOI":"10.1093\/bioinformatics\/btu349","type":"journal-article","created":{"date-parts":[[2014,5,22]],"date-time":"2014-05-22T01:26:07Z","timestamp":1400721967000},"page":"2691-2692","source":"Crossref","is-referenced-by-count":6,"title":["HTML5 PivotViewer: high-throughput visualization and querying of image data on the web"],"prefix":"10.1093","volume":"30","author":[{"given":"Stephen","family":"Taylor","sequence":"first","affiliation":[{"name":"1 Computational Biology Research Group, Weatherall Institute of Molecular Medicine, University of Oxford, John Radcliffe Hospital, Headington, Oxford OX3 9DS, UK and 2 Coritsu Group, Adelaide, South Australia 5000, Australia"}]},{"given":"Roger","family":"Noble","sequence":"additional","affiliation":[{"name":"1 Computational Biology Research Group, Weatherall Institute of Molecular Medicine, University of Oxford, John Radcliffe Hospital, Headington, Oxford OX3 9DS, UK and 2 Coritsu Group, Adelaide, South Australia 5000, Australia"}]}],"member":"286","published-online":{"date-parts":[[2014,5,21]]},"reference":[{"key":"2023012711553751500_btu349-B1","doi-asserted-by":"crossref","first-page":"245","DOI":"10.1038\/nmeth.1896","article-title":"OMERO: flexible, model-driven data management for experimental biology","volume":"9","author":"Allan","year":"2012","journal-title":"Nat. Methods"},{"key":"2023012711553751500_btu349-B2","doi-asserted-by":"crossref","first-page":"213","DOI":"10.1111\/j.1365-2818.2006.01706.x","article-title":"A guided tour into subcellular colocalisation analysis in light microscopy","volume":"224","author":"Bolte","year":"2006","journal-title":"J. Microscopy"},{"key":"2023012711553751500_btu349-B3","doi-asserted-by":"crossref","first-page":"666","DOI":"10.1038\/nmeth.2073","article-title":"A call for bioimaging software usability","volume":"9","author":"Carpenter","year":"2012","journal-title":"Nat. Methods"},{"key":"2023012711553751500_btu349-B4","doi-asserted-by":"crossref","first-page":"e92915","DOI":"10.1371\/journal.pone.0092915","article-title":"ATRX dysfunction induces replication defects in primary mouse cells","volume":"9","author":"Clynes","year":"2014","journal-title":"PLoS One"},{"key":"2023012711553751500_btu349-B5","doi-asserted-by":"crossref","first-page":"47","DOI":"10.4103\/0019-509X.12345","article-title":"Affordable image analysis using NIH Image\/ImageJ","volume":"41","author":"Girish","year":"2004","journal-title":"Indian J. Cancer"},{"key":"2023012711553751500_btu349-B6","doi-asserted-by":"crossref","first-page":"381","DOI":"10.1093\/bioinformatics\/bts677","article-title":"Scribl: an HTML5 Canvas-based graphics library for visualising genomic data over the web","volume":"29","author":"Miller","year":"2013","journal-title":"Bioinformatics"},{"key":"2023012711553751500_btu349-B7","doi-asserted-by":"crossref","first-page":"e31690","DOI":"10.1371\/journal.pone.0031690","article-title":"iCanPlot: visual exploration of high-throughput omics data using interactive Canvas plotting","volume":"7","author":"Sinha","year":"2012","journal-title":"PloS One"},{"key":"2023012711553751500_btu349-B8","doi-asserted-by":"crossref","first-page":"18","DOI":"10.1186\/2043-9113-1-18","article-title":"Automated generation of massive image knowledge collections using Microsoft Live Labs Pivot to promote neuroimaging and translational research","volume":"1","author":"Viangteeravat","year":"2011","journal-title":"J. Clin. Bioinformatics"}],"container-title":["Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/30\/18\/2691\/48929369\/bioinformatics_30_18_2691.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/30\/18\/2691\/48929369\/bioinformatics_30_18_2691.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,7,13]],"date-time":"2023-07-13T09:39:30Z","timestamp":1689241170000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article\/30\/18\/2691\/2475614"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2014,5,21]]},"references-count":8,"journal-issue":{"issue":"18","published-print":{"date-parts":[[2014,9,15]]}},"URL":"https:\/\/doi.org\/10.1093\/bioinformatics\/btu349","relation":{},"ISSN":["1367-4811","1367-4803"],"issn-type":[{"value":"1367-4811","type":"electronic"},{"value":"1367-4803","type":"print"}],"subject":[],"published-other":{"date-parts":[[2014,9,15]]},"published":{"date-parts":[[2014,5,21]]}}}