{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,8]],"date-time":"2026-08-08T08:15:04Z","timestamp":1786176904269,"version":"3.56.0"},"reference-count":7,"publisher":"Oxford University Press (OUP)","issue":"2","license":[{"start":{"date-parts":[[2016,10,12]],"date-time":"2016-10-12T00:00:00Z","timestamp":1476230400000},"content-version":"vor","delay-in-days":380,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2016,1,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: Cytoscape.js is an open-source JavaScript-based graph library. Its most common use case is as a visualization software component, so it can be used to render interactive graphs in a web browser. It also can be used in a headless manner, useful for graph operations on a server, such as Node.js.<\/jats:p>\n               <jats:p>Availability and implementation: Cytoscape.js is implemented in JavaScript. Documentation, downloads and source code are available at http:\/\/js.cytoscape.org.<\/jats:p>\n               <jats:p>Contact: \u00a0gary.bader@utoronto.ca<\/jats:p>","DOI":"10.1093\/bioinformatics\/btv557","type":"journal-article","created":{"date-parts":[[2015,9,29]],"date-time":"2015-09-29T01:59:04Z","timestamp":1443491944000},"page":"309-311","source":"Crossref","is-referenced-by-count":600,"title":["Cytoscape.js: a graph theory library for visualisation and analysis"],"prefix":"10.1093","volume":"32","author":[{"given":"Max","family":"Franz","sequence":"first","affiliation":[{"name":"The Donnelly Centre, University of Toronto, Toronto, ON M5S 3E1, Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Christian T.","family":"Lopes","sequence":"additional","affiliation":[{"name":"The Donnelly Centre, University of Toronto, Toronto, ON M5S 3E1, Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Gerardo","family":"Huck","sequence":"additional","affiliation":[{"name":"The Donnelly Centre, University of Toronto, Toronto, ON M5S 3E1, Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yue","family":"Dong","sequence":"additional","affiliation":[{"name":"The Donnelly Centre, University of Toronto, Toronto, ON M5S 3E1, Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Onur","family":"Sumer","sequence":"additional","affiliation":[{"name":"The Donnelly Centre, University of Toronto, Toronto, ON M5S 3E1, Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Gary D.","family":"Bader","sequence":"additional","affiliation":[{"name":"The Donnelly Centre, University of Toronto, Toronto, ON M5S 3E1, Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2015,9,28]]},"reference":[{"key":"2023020110282511100_btv557-B1","doi-asserted-by":"crossref","first-page":"D1228","DOI":"10.1093\/nar\/gks1147","article-title":"InnateDB: systems biology of innate immunity and beyond\u2014recent updates and continuing curation","volume":"41","author":"Breuer","year":"2013","journal-title":"Nucleic Acids Res."},{"key":"2023020110282511100_btv557-B2","doi-asserted-by":"crossref","first-page":"56","DOI":"10.12688\/f1000research.3-56.v1","article-title":"The BioJS article collection of open source components for biological data visualisation","volume":"3","author":"Corpas","year":"2014","journal-title":"F1000Res."},{"key":"2023020110282511100_btv557-B3","doi-asserted-by":"crossref","first-page":"D717","DOI":"10.1093\/nar\/gkt1158","article-title":"Saccharomyces genome database provides new regulation data","volume":"42","author":"Costanzo","year":"2014","journal-title":"Nucleic Acids Res."},{"key":"2023020110282511100_btv557-B4","doi-asserted-by":"crossref","first-page":"D793","DOI":"10.1093\/nar\/gks1055","article-title":"The ConsensusPathDB interaction database: 2013 update","volume":"41","author":"Kamburov","year":"2013","journal-title":"Nucleic Acids Res."},{"key":"2023020110282511100_btv557-B5","doi-asserted-by":"crossref","first-page":"2347","DOI":"10.1093\/bioinformatics\/btq430","article-title":"Cytoscape web: an interactive web-based network browser","volume":"26","author":"Lopes","year":"2010","journal-title":"Bioinformatics"},{"key":"2023020110282511100_btv557-B6","doi-asserted-by":"crossref","first-page":"2498","DOI":"10.1101\/gr.1239303","article-title":"Cytoscape: a software environment for integrated models of biomolecular interaction networks","volume":"13","author":"Shannon","year":"2003","journal-title":"Genome Res."},{"key":"2023020110282511100_btv557-B7","doi-asserted-by":"crossref","first-page":"W214","DOI":"10.1093\/nar\/gkq537","article-title":"The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function","volume":"38","author":"Warde-Farley","year":"2010","journal-title":"Nucleic Acids Res."}],"container-title":["Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/32\/2\/309\/49016536\/bioinformatics_32_2_309.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/32\/2\/309\/49016536\/bioinformatics_32_2_309.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,2,1]],"date-time":"2023-02-01T21:37:27Z","timestamp":1675287447000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article\/32\/2\/309\/1744007"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2015,9,28]]},"references-count":7,"journal-issue":{"issue":"2","published-print":{"date-parts":[[2016,1,15]]}},"URL":"https:\/\/doi.org\/10.1093\/bioinformatics\/btv557","relation":{},"ISSN":["1367-4811","1367-4803"],"issn-type":[{"value":"1367-4811","type":"electronic"},{"value":"1367-4803","type":"print"}],"subject":[],"published-other":{"date-parts":[[2016,1,15]]},"published":{"date-parts":[[2015,9,28]]}}}