{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,12,6]],"date-time":"2025-12-06T04:58:05Z","timestamp":1764997085769},"reference-count":8,"publisher":"Oxford University Press (OUP)","issue":"19","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2016,10,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: Biodiversity studies are relying increasingly on primary biodiversity records (PBRs) for modelling and analysis. Because biodiversity data are frequently \u2018harvested\u2019\u2014i.e. not collected by the researcher for that particular study, but obtained from data aggregators such as the Global Biodiversity Information Facility\u2014researchers need to be aware of strengths and weaknesses of their data before they venture into further analysis. R is becoming a lingua franca of data exploration and analysis. Here, we describe an R package, bdvis, which facilitates efforts to understand the gaps and strengths of PBR data with quick and useful visualization functions.<\/jats:p>\n               <jats:p>Availability and Implementation: The full code of the R package bdvis, along with instructions on how to install and use it, is available via CRAN \u2013 The Comprehensive R Archive Network (http:\/\/cran.r-project.org\/web\/packages\/bdvis\/index.html) and in the corresponding author\u2019s main GitHub repository: http:\/\/www.github.com\/vijaybarve\/bdvis. The source code is licensed under CC0<\/jats:p>\n               <jats:p>Contact: \u00a0vijay.barve@gmail.com<\/jats:p>","DOI":"10.1093\/bioinformatics\/btw333","type":"journal-article","created":{"date-parts":[[2016,6,11]],"date-time":"2016-06-11T03:54:37Z","timestamp":1465617277000},"page":"3049-3050","source":"Crossref","is-referenced-by-count":11,"title":["bdvis: visualizing biodiversity data in R"],"prefix":"10.1093","volume":"32","author":[{"given":"Vijay","family":"Barve","sequence":"first","affiliation":[{"name":"1 Florida Museum of Natural History, University of Florida, Gainesville, FL, USA"}]},{"given":"Javier","family":"Otegui","sequence":"additional","affiliation":[{"name":"2 University of Colorado Museum of Natural History, Boulder, CO, USA"}]}],"member":"286","published-online":{"date-parts":[[2016,6,10]]},"reference":[{"key":"2023020113463313200_btw333-B1","doi-asserted-by":"crossref","first-page":"352","DOI":"10.1111\/j.1466-8238.2011.00676.x","article-title":"Beta-diversity gradients of butterflies along productivity axes","volume":"21","author":"Andrew","year":"2012","journal-title":"Global Ecol. Biogeogr"},{"key":"2023020113463313200_btw333-B2","volume-title":"Uses of Primary species- Occurrence Data, Version 1.0","author":"Chapman","year":"2005"},{"key":"2023020113463313200_btw333-B3","doi-asserted-by":"crossref","DOI":"10.5751\/ES-04582-170115","article-title":"A biodiversity informatics approach to ethnobotany: Meta-analysis of plant use patterns in Ecuador","volume":"17","author":"De la Torre","year":"2012","journal-title":"Ecol. Soc"},{"key":"2023020113463313200_btw333-B4","doi-asserted-by":"crossref","first-page":"2207","DOI":"10.1093\/bioinformatics\/bts359","article-title":"BIDDSAT: visualizing the content of biodiversity data publishers in the global biodiversity information facility network","volume":"28","author":"Otegui","year":"2012","journal-title":"Bioinformatics"},{"key":"2023020113463313200_btw333-B5","doi-asserted-by":"crossref","first-page":"e55144.","DOI":"10.1371\/journal.pone.0055144","article-title":"Assessing the primary data hosted by the Spanish node of the Global Biodiversity Information Facility (GBIF)","volume":"8","author":"Otegui","year":"2013","journal-title":"PLoS ONE"},{"key":"2023020113463313200_btw333-B6","first-page":"173","article-title":"On the dates of the GBIF mobilised primary biodiversity data records","volume":"8","author":"Otegui","year":"2013","journal-title":"Biodivers. 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