{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,2]],"date-time":"2026-03-02T22:08:57Z","timestamp":1772489337122,"version":"3.50.1"},"reference-count":7,"publisher":"Oxford University Press (OUP)","issue":"3","license":[{"start":{"date-parts":[[2016,10,14]],"date-time":"2016-10-14T00:00:00Z","timestamp":1476403200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/journals\/pages\/about_us\/legal\/notices"}],"funder":[{"name":"National Programs for High Technology Research and Development","award":["2014AA021503"],"award-info":[{"award-number":["2014AA021503"]}]},{"name":"National Programs for High Technology Research and Development","award":["2015AA020108"],"award-info":[{"award-number":["2015AA020108"]}]},{"name":"International Partnership Program of Chinese Academy of Sciences","award":["153F11KYSB2016008"],"award-info":[{"award-number":["153F11KYSB2016008"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2017,2,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:sec>\n                  <jats:title>Summary<\/jats:title>\n                  <jats:p>Phylogeny reconstruction is fundamentally crucial for molecular evolutionary studies but remains computationally challenging. Here we present CloudPhylo, a tool built on Spark that is capable of processing large-scale datasets for phylogeny reconstruction. As testified on empirical data, CloudPhylo is well suited for big data analysis, achieving high efficiency and good scalability on phylogenetic tree inference.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Availability and Implementation<\/jats:title>\n                  <jats:p>https:\/\/github.com\/XingjianXu\/cloudphylo<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Supplementary information<\/jats:title>\n                  <jats:p>Supplementary data are available at Bioinformatics online.<\/jats:p>\n               <\/jats:sec>","DOI":"10.1093\/bioinformatics\/btw645","type":"journal-article","created":{"date-parts":[[2016,10,11]],"date-time":"2016-10-11T14:19:40Z","timestamp":1476195580000},"page":"438-440","source":"Crossref","is-referenced-by-count":6,"title":["CloudPhylo: a fast and scalable tool for phylogeny reconstruction"],"prefix":"10.1093","volume":"33","author":[{"given":"Xingjian","family":"Xu","sequence":"first","affiliation":[{"name":"CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics (BIG), Chinese Academy of Sciences (CAS), Beijing, China"},{"name":"BIG Data Center, Beijing Institute of Genomics (BIG), Chinese Academy of Sciences (CAS), Beijing, China"},{"name":"University of Chinese Academy of Sciences, Beijing, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zhaohua","family":"Ji","sequence":"additional","affiliation":[{"name":"College of Computer and Information Engineering, Inner Mongolia Normal University, Hohhot, China"},{"name":"College of Environment and Energy Engineering, Beijing University of Technology, Beijing, China"},{"name":"Inner Mongolia Xing'an Vocational and Technical College, Wulanhaote, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zhang","family":"Zhang","sequence":"additional","affiliation":[{"name":"CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics (BIG), Chinese Academy of Sciences (CAS), Beijing, China"},{"name":"BIG Data Center, Beijing Institute of Genomics (BIG), Chinese Academy of Sciences (CAS), Beijing, China"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2016,10,14]]},"reference":[{"key":"2023020204411856000_btw645-B1","doi-asserted-by":"crossref","first-page":"107","DOI":"10.1145\/1327452.1327492","article-title":"MapReduce","volume":"51","author":"Dean","year":"2008","journal-title":"Commun. 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