{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,28]],"date-time":"2026-04-28T14:32:37Z","timestamp":1777386757381,"version":"3.51.4"},"reference-count":14,"publisher":"Oxford University Press (OUP)","issue":"6","license":[{"start":{"date-parts":[[2016,12,16]],"date-time":"2016-12-16T00:00:00Z","timestamp":1481846400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/journals\/pages\/about_us\/legal\/notices"}],"funder":[{"name":"intramural funds of Vilnius University"},{"name":"postdoctoral fellowship"},{"name":"European Union Structural"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2017,3,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:sec>\n                  <jats:title>Summary<\/jats:title>\n                  <jats:p>The PPI3D web server is focused on searching and analyzing the structural data on protein\u2013protein interactions. Reducing the data redundancy by clustering and analyzing the properties of interaction interfaces using Voronoi tessellation makes this software a highly effective tool for addressing different questions related to protein interactions.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Availability and Implementation<\/jats:title>\n                  <jats:p>The server is freely accessible at http:\/\/bioinformatics.lt\/software\/ppi3d\/.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Supplementary information<\/jats:title>\n                  <jats:p>Supplementary data are available at Bioinformatics online.<\/jats:p>\n               <\/jats:sec>","DOI":"10.1093\/bioinformatics\/btw756","type":"journal-article","created":{"date-parts":[[2016,11,22]],"date-time":"2016-11-22T12:05:53Z","timestamp":1479816353000},"page":"935-937","source":"Crossref","is-referenced-by-count":44,"title":["The PPI3D web server for searching, analyzing and modeling protein\u2013protein interactions in the context of 3D structures"],"prefix":"10.1093","volume":"33","author":[{"given":"Justas","family":"Dapk\u016bnas","sequence":"first","affiliation":[{"name":"Institute of Biotechnology, Vilnius University, Vilnius, Lithuania"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Albertas","family":"Timinskas","sequence":"additional","affiliation":[{"name":"Institute of Biotechnology, Vilnius University, Vilnius, Lithuania"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Kliment","family":"Olechnovi\u010d","sequence":"additional","affiliation":[{"name":"Institute of Biotechnology, Vilnius University, Vilnius, Lithuania"},{"name":"Faculty of Mathematics and Informatics, Vilnius University, Vilnius, Lithuania"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mindaugas","family":"Margelevi\u010dius","sequence":"additional","affiliation":[{"name":"Institute of Biotechnology, Vilnius University, Vilnius, Lithuania"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Rytis","family":"Di\u010di\u016bnas","sequence":"additional","affiliation":[{"name":"Institute of Biotechnology, Vilnius University, Vilnius, Lithuania"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"\u010ceslovas","family":"Venclovas","sequence":"additional","affiliation":[{"name":"Institute of Biotechnology, Vilnius University, Vilnius, Lithuania"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2016,12,16]]},"reference":[{"key":"2023020204512458000_btw756-B1","doi-asserted-by":"crossref","first-page":"989","DOI":"10.1016\/j.jmb.2003.07.006","article-title":"The relationship between sequence and interaction divergence in proteins","volume":"332","author":"Aloy","year":"2003","journal-title":"J. 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