{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,17]],"date-time":"2026-04-17T20:21:52Z","timestamp":1776457312656,"version":"3.51.2"},"reference-count":22,"publisher":"Oxford University Press (OUP)","issue":"15","license":[{"start":{"date-parts":[[2018,3,14]],"date-time":"2018-03-14T00:00:00Z","timestamp":1520985600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100004727","name":"VIB","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100004727","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Flanders Institute for Biotechnology, Belgium"},{"DOI":"10.13039\/501100007660","name":"University of Antwerp","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100007660","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Flanders Agency for Innovation and Entrepreneurship"},{"DOI":"10.13039\/100000001","name":"NSF","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000082","name":"DGE","doi-asserted-by":"publisher","award":["1339067"],"award-info":[{"award-number":["1339067"]}],"id":[{"id":"10.13039\/100000082","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2018,8,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:sec>\n                    <jats:title>Summary<\/jats:title>\n                    <jats:p>Here we describe NanoPack, a set of tools developed for visualization and processing of long-read sequencing data from Oxford Nanopore Technologies and Pacific Biosciences.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Availability and implementation<\/jats:title>\n                    <jats:p>The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code can be found at https:\/\/github.com\/wdecoster\/nanopack, together with links to separate scripts and their documentation. The scripts are compatible with Linux, Mac OS and the MS Windows 10 subsystem for Linux and are available as a graphical user interface, a web service at http:\/\/nanoplot.bioinf.be and command line tools.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Supplementary information<\/jats:title>\n                    <jats:p>Supplementary data are available at Bioinformatics online.<\/jats:p>\n                  <\/jats:sec>","DOI":"10.1093\/bioinformatics\/bty149","type":"journal-article","created":{"date-parts":[[2018,3,12]],"date-time":"2018-03-12T16:12:02Z","timestamp":1520871122000},"page":"2666-2669","source":"Crossref","is-referenced-by-count":2842,"title":["NanoPack: visualizing and processing long-read sequencing data"],"prefix":"10.1093","volume":"34","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-5248-8197","authenticated-orcid":false,"given":"Wouter","family":"De Coster","sequence":"first","affiliation":[{"name":"Neurodegenerative Brain Diseases Group, VIB & University of Antwerp, Antwerp, Belgium"}]},{"given":"Svenn","family":"D\u2019Hert","sequence":"additional","affiliation":[{"name":"Bioinformatics, Neuromics Support Facility, Center for Molecular Neurology, VIB & University of Antwerp, Antwerp, Belgium"}]},{"given":"Darrin T","family":"Schultz","sequence":"additional","affiliation":[{"name":"Department of Biomolecular Engineering and Bioinformatics, University of California Santa Cruz, Santa Cruz, CA, USA"}]},{"given":"Marc","family":"Cruts","sequence":"additional","affiliation":[{"name":"Neurodegenerative Brain Diseases Group, VIB & University of Antwerp, Antwerp, Belgium"}]},{"given":"Christine","family":"Van Broeckhoven","sequence":"additional","affiliation":[{"name":"Neurodegenerative Brain Diseases Group, VIB & University of Antwerp, Antwerp, Belgium"}]}],"member":"286","published-online":{"date-parts":[[2018,3,14]]},"reference":[{"key":"2023012713083557400_bty149-B1","author":"Babraham Bioinformatics and Andrews","year":"2010"},{"key":"2023012713083557400_bty149-B2","doi-asserted-by":"crossref","first-page":"1422","DOI":"10.1093\/bioinformatics\/btp163","article-title":"Biopython: freely Available Python Tools for Computational Molecular Biology and Bioinformatics","volume":"25","author":"Cock","year":"2009","journal-title":"Bioinformatics"},{"key":"2023012713083557400_bty149-B3","author":"Dale","year":"2017"},{"key":"2023012713083557400_bty149-B4","doi-asserted-by":"crossref","first-page":"3935.","DOI":"10.1038\/s41598-017-03996-z","article-title":"De novo yeast genome assemblies from MinION, PacBio and MiSeq platforms","volume":"7","author":"Giordano","year":"2017","journal-title":"Sci. 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