{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,13]],"date-time":"2026-05-13T07:55:28Z","timestamp":1778658928197,"version":"3.51.4"},"reference-count":17,"publisher":"Oxford University Press (OUP)","issue":"15","license":[{"start":{"date-parts":[[2018,3,24]],"date-time":"2018-03-24T00:00:00Z","timestamp":1521849600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"name":"DEPTH"},{"DOI":"10.13039\/100010663","name":"European Research Council","doi-asserted-by":"publisher","award":["322749"],"award-info":[{"award-number":["322749"]}],"id":[{"id":"10.13039\/100010663","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2018,8,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:sec>\n                  <jats:title>Summary<\/jats:title>\n                  <jats:p>The visualization of molecular interactions annotated in web resources is useful to offer to users such information in a clear intuitive layout. These interactions are frequently represented as binary interactions that are laid out in free space where, different entities, cellular compartments and interaction types are hardly distinguishable. Signaling Pathway Visualizer is a free open source JavaScript library, which offers a series of pre-defined elements, compartments and interaction types meant to facilitate the representation of signaling pathways consisting of causal interactions without neglecting simple protein\u2013protein interaction networks.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Availability and implementation<\/jats:title>\n                  <jats:p>Freely available under Apache version 2 license; Source code: https:\/\/github.com\/Sinnefa\/SPV_Signaling_Pathway_Visualizer_v1.0. Language: JavaScript; Web technology: Scalable Vector Graphics; Libraries: D3.js.<\/jats:p>\n               <\/jats:sec>","DOI":"10.1093\/bioinformatics\/bty188","type":"journal-article","created":{"date-parts":[[2018,3,23]],"date-time":"2018-03-23T20:50:40Z","timestamp":1521838240000},"page":"2684-2686","source":"Crossref","is-referenced-by-count":10,"title":["SPV: a JavaScript Signaling Pathway Visualizer"],"prefix":"10.1093","volume":"34","author":[{"given":"Alberto","family":"Calderone","sequence":"first","affiliation":[{"name":"Bioinformatics and Computational Biology Unit, Department of Biology, University of Rome \u2018Tor Vergata\u2019, Rome, Italy"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Gianni","family":"Cesareni","sequence":"additional","affiliation":[{"name":"Bioinformatics and Computational Biology Unit, Department of Biology, University of Rome \u2018Tor Vergata\u2019, Rome, Italy"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2018,3,24]]},"reference":[{"key":"2023012713082956200_bty188-B1","doi-asserted-by":"crossref","first-page":"528","DOI":"10.1038\/nmeth.1637","article-title":"PSICQUIC and PSISCORE: accessing and scoring molecular interactions","volume":"8","author":"Aranda","year":"2011","journal-title":"Nat. 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