{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,6]],"date-time":"2026-03-06T04:11:13Z","timestamp":1772770273801,"version":"3.50.1"},"reference-count":17,"publisher":"Oxford University Press (OUP)","issue":"24","license":[{"start":{"date-parts":[[2018,6,15]],"date-time":"2018-06-15T00:00:00Z","timestamp":1529020800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/journals\/pages\/open_access\/funder_policies\/chorus\/standard_publication_model"}],"funder":[{"DOI":"10.13039\/100012728","name":"Frederick National Laboratory for Cancer Research","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100012728","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["HHSN261200800001E"],"award-info":[{"award-number":["HHSN261200800001E"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Intramural Research Program"},{"DOI":"10.13039\/100000002","name":"NIH","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"name":"National Cancer Institute, Center for Cancer Research"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2018,12,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:sec>\n                  <jats:title>Summary<\/jats:title>\n                  <jats:p>Creating clear, visually pleasing 2D depictions of RNA and DNA strands and their interactions is important to facilitate and communicate insights related to nucleic acid structure. Here we present RiboSketch, a secondary structure image production application that enables the visualization of multistranded structures via layout algorithms, comprehensive editing capabilities, and a multitude of simulation modes. These interactive features allow RiboSketch to create publication quality diagrams for structures with a wide range of composition, size and complexity. The program may be run in any web browser without the need for installation, or as a standalone Java application.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Availability and implementation<\/jats:title>\n                  <jats:p>https:\/\/rnastructure.cancer.gov\/ribosketch<\/jats:p>\n               <\/jats:sec>","DOI":"10.1093\/bioinformatics\/bty468","type":"journal-article","created":{"date-parts":[[2018,6,13]],"date-time":"2018-06-13T03:13:47Z","timestamp":1528859627000},"page":"4297-4299","source":"Crossref","is-referenced-by-count":29,"title":["RiboSketch: versatile visualization of multi-stranded RNA and DNA secondary structure"],"prefix":"10.1093","volume":"34","author":[{"given":"Jacob S","family":"Lu","sequence":"first","affiliation":[{"name":"RNA Biology Laboratory, National Cancer Institute, Frederick, MD, USA"}]},{"given":"Eckart","family":"Bindewald","sequence":"additional","affiliation":[{"name":"Basic Science Program, RNA Biology Laboratory, Frederick National Laboratory for Cancer Research sponsored by the National Cancer Institute, Frederick, MD, USA"}]},{"given":"Wojciech K","family":"Kasprzak","sequence":"additional","affiliation":[{"name":"Basic Science Program, RNA Biology Laboratory, Frederick National Laboratory for Cancer Research sponsored by the National Cancer Institute, Frederick, MD, USA"}]},{"given":"Bruce A","family":"Shapiro","sequence":"additional","affiliation":[{"name":"RNA Biology Laboratory, National Cancer Institute, Frederick, MD, USA"}]}],"member":"286","published-online":{"date-parts":[[2018,6,15]]},"reference":[{"key":"2023012712244715600_bty468-B1","first-page":"167","article-title":"An improved algorithm for nucleic acid secondary structure display","volume":"4","author":"Bruccoleri","year":"1988","journal-title":"Comput. 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