{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,4]],"date-time":"2025-11-04T23:26:47Z","timestamp":1762298807829,"version":"3.37.3"},"reference-count":8,"publisher":"Oxford University Press (OUP)","issue":"2","license":[{"start":{"date-parts":[[2018,6,28]],"date-time":"2018-06-28T00:00:00Z","timestamp":1530144000000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/4.0\/"}],"funder":[{"name":"Institute of Molecular and Cell Biology, Agency for Science, Technology and Research, Singapore Ministry of Education","award":["MOE2016-T2-1-001"],"award-info":[{"award-number":["MOE2016-T2-1-001"]}]},{"DOI":"10.13039\/501100001349","name":"Singapore National Medical Research Council","doi-asserted-by":"crossref","award":["NMRC-CG-M009"],"award-info":[{"award-number":["NMRC-CG-M009"]}],"id":[{"id":"10.13039\/501100001349","id-type":"DOI","asserted-by":"crossref"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2019,1,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:sec>\n                  <jats:title>Summary<\/jats:title>\n                  <jats:p>Data visualization is often regarded as a post hoc step for verifying statistically significant results in the analysis of high-throughput datasets. This common practice leaves a large amount of raw data behind, from which more information can be extracted. However, existing solutions do not provide capabilities to explore large-scale raw datasets using biologically sensible queries, nor do they allow user interaction based real-time customization of graphics. To address these drawbacks, we have designed an open-source, web-based tool called Systems-Level Interactive Data Exploration, or SLIDE to visualize large-scale -omics data interactively. SLIDE\u2019s interface makes it easier for scientists to explore quantitative expression data in multiple resolutions in a single screen.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Availability and implementation<\/jats:title>\n                  <jats:p>SLIDE is publicly available under BSD license both as an online version as well as a stand-alone version at https:\/\/github.com\/soumitag\/SLIDE.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Supplementary information<\/jats:title>\n                  <jats:p>Supplementary data are available at Bioinformatics online.<\/jats:p>\n               <\/jats:sec>","DOI":"10.1093\/bioinformatics\/bty534","type":"journal-article","created":{"date-parts":[[2018,6,27]],"date-time":"2018-06-27T12:16:06Z","timestamp":1530101766000},"page":"346-348","source":"Crossref","is-referenced-by-count":9,"title":["SLIDE \u2013 a web-based tool for interactive visualization of large-scale \u2013 omics data"],"prefix":"10.1093","volume":"35","author":[{"given":"Soumita","family":"Ghosh","sequence":"first","affiliation":[{"name":"Institute of Molecular and Cell Biology, A*STAR, Singapore, Singapore"},{"name":"Saw Swee Hock School of Public Health, National University of Singapore, Singapore, Singapore"}]},{"given":"Abhik","family":"Datta","sequence":"additional","affiliation":[{"name":"Centre for BioImaging Sciences and Department of Biological Sciences, National University of Singapore, Singapore, Singapore"}]},{"given":"Kaisen","family":"Tan","sequence":"additional","affiliation":[{"name":"Department of Otolaryngology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore and"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6687-3088","authenticated-orcid":false,"given":"Hyungwon","family":"Choi","sequence":"additional","affiliation":[{"name":"Institute of Molecular and Cell Biology, A*STAR, Singapore, Singapore"},{"name":"Saw Swee Hock School of Public Health, National University of Singapore, Singapore, Singapore"},{"name":"Department of Medicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore"}]}],"member":"286","published-online":{"date-parts":[[2018,6,28]]},"reference":[{"key":"2023013107232904800_bty534-B1","doi-asserted-by":"crossref","first-page":"25","DOI":"10.1038\/75556","article-title":"Gene Ontology: tool for the unification of biology","volume":"25","author":"Ashburner","year":"2000","journal-title":"Nat. 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