{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,19]],"date-time":"2026-03-19T00:50:44Z","timestamp":1773881444399,"version":"3.50.1"},"reference-count":8,"publisher":"Oxford University Press (OUP)","issue":"4","license":[{"start":{"date-parts":[[2018,8,7]],"date-time":"2018-08-07T00:00:00Z","timestamp":1533600000000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/100004440","name":"Wellcome Trust","doi-asserted-by":"publisher","award":["203014\/Z\/16\/Z"],"award-info":[{"award-number":["203014\/Z\/16\/Z"]}],"id":[{"id":"10.13039\/100004440","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100010663","name":"European Research Council","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100010663","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Royal Society Wolfson Research Merit Award"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2019,2,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:sec>\n                  <jats:title>Summary<\/jats:title>\n                  <jats:p>We present LipidFinder online, hosted on the LIPID MAPS website, as a liquid chromatography\/mass spectrometry (LC\/MS) workflow comprising peak filtering, MS searching and statistical analysis components, highly customized for interrogating lipidomic data. The online interface of LipidFinder includes several innovations such as comprehensive parameter tuning, a MS search engine employing in-house customized, curated and computationally generated databases and multiple reporting\/display options. A set of integrated statistical analysis tools which enable users to identify those features which are significantly-altered under the selected experimental conditions, thereby greatly reducing the complexity of the peaklist prior to MS searching is included. LipidFinder is presented as a highly flexible, extensible user-friendly online workflow which leverages the lipidomics knowledge base and resources of the LIPID MAPS website, long recognized as a leading global lipidomics portal.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Availability and implementation<\/jats:title>\n                  <jats:p>LipidFinder on LIPID MAPS is available at: http:\/\/www.lipidmaps.org\/data\/LF.<\/jats:p>\n               <\/jats:sec>","DOI":"10.1093\/bioinformatics\/bty679","type":"journal-article","created":{"date-parts":[[2018,8,6]],"date-time":"2018-08-06T19:12:45Z","timestamp":1533582765000},"page":"685-687","source":"Crossref","is-referenced-by-count":44,"title":["LipidFinder on LIPID MAPS: peak filtering, MS searching and statistical analysis for lipidomics"],"prefix":"10.1093","volume":"35","author":[{"given":"Eoin","family":"Fahy","sequence":"first","affiliation":[{"name":"Department of Bioengineering, University of California San Diego, San Diego, CA, USA"}]},{"given":"Jorge","family":"Alvarez-Jarreta","sequence":"additional","affiliation":[{"name":"Institute of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, UK"}]},{"given":"Christopher J","family":"Brasher","sequence":"additional","affiliation":[{"name":"Institute of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, UK"}]},{"given":"An","family":"Nguyen","sequence":"additional","affiliation":[{"name":"Babraham Institute, Babraham Research Campus, Cambridge, UK"}]},{"given":"Jade I","family":"Hawksworth","sequence":"additional","affiliation":[{"name":"Institute of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, UK"}]},{"given":"Patricia","family":"Rodrigues","sequence":"additional","affiliation":[{"name":"Institute of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, UK"}]},{"given":"Sven","family":"Meckelmann","sequence":"additional","affiliation":[{"name":"Institute of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, UK"}]},{"given":"Stuart M","family":"Allen","sequence":"additional","affiliation":[{"name":"School of Computer Science and Informatics, Cardiff University, Cardiff, UK"}]},{"given":"Valerie B","family":"O'Donnell","sequence":"additional","affiliation":[{"name":"Institute of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, UK"}]}],"member":"286","published-online":{"date-parts":[[2018,8,7]]},"reference":[{"key":"2023051511012659900_bty679-B1","doi-asserted-by":"crossref","DOI":"10.1007\/s00726-012-1289-8","article-title":"Current challenges in software solutions for mass spectrometry-based quantitative proteomics","volume":"43","author":"Cappadona","year":"2012","journal-title":"Amino Acids"},{"key":"2023051511012659900_bty679-B2","doi-asserted-by":"crossref","first-page":"637","DOI":"10.1016\/j.bbalip.2011.06.009","article-title":"Lipid classification, structures and tools","volume":"1811","author":"Fahy","year":"2011","journal-title":"Biochim. 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