{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,8]],"date-time":"2025-11-08T12:15:30Z","timestamp":1762604130063},"reference-count":8,"publisher":"Oxford University Press (OUP)","issue":"7","license":[{"start":{"date-parts":[[2018,8,31]],"date-time":"2018-08-31T00:00:00Z","timestamp":1535673600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/journals\/pages\/open_access\/funder_policies\/chorus\/standard_publication_model"}],"funder":[{"name":"Research Grant Council of Hong Kong","award":["783813","17125114","17146616"],"award-info":[{"award-number":["783813","17125114","17146616"]}]},{"name":"Hong Kong PhD Fellowship"},{"name":"Research Grant Council of Hong Kong"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2019,4,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:sec>\n                  <jats:title>Summary<\/jats:title>\n                  <jats:p>HLA allele imputation from SNP genotypes has become increasingly useful, but its accuracy is heavily dependent on the reference panels used. HLA-IMPUTER implements HIBAG algorithm for HLA imputation with different population specific reference panels, including a new Han Chinese reference panel derived from 10 689 samples. We provide a convenient platform for researchers to impute HLA alleles and perform association analysis.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Availability and implementation<\/jats:title>\n                  <jats:p>http:\/\/wyanglab.org: 3838\/RefPanelWebsite\/.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Supplementary information<\/jats:title>\n                  <jats:p>Supplementary data are available at Bioinformatics online.<\/jats:p>\n               <\/jats:sec>","DOI":"10.1093\/bioinformatics\/bty730","type":"journal-article","created":{"date-parts":[[2018,8,30]],"date-time":"2018-08-30T19:51:16Z","timestamp":1535658676000},"page":"1244-1246","source":"Crossref","is-referenced-by-count":5,"title":["HLA-IMPUTER: an easy to use web application for HLA imputation and association analysis using population-specific reference panels"],"prefix":"10.1093","volume":"35","author":[{"given":"Jiangshan J","family":"Shen","sequence":"first","affiliation":[{"name":"Department of Paediatrics and Adolescent Medicine, Li Ka Shing Faculty of Medicine, University of Hong Kong, Hong Kong, SAR China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Chao","family":"Yang","sequence":"additional","affiliation":[{"name":"Department of Dermatology, No. 1 Hospital and Key Laboratory of Dermatology, Ministry of Education, Anhui Medical University, Hefei, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yong-Fei","family":"Wang","sequence":"additional","affiliation":[{"name":"Department of Paediatrics and Adolescent Medicine, Li Ka Shing Faculty of Medicine, University of Hong Kong, Hong Kong, SAR China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ting-You","family":"Wang","sequence":"additional","affiliation":[{"name":"Department of Paediatrics and Adolescent Medicine, Li Ka Shing Faculty of Medicine, University of Hong Kong, Hong Kong, SAR China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mengbiao","family":"Guo","sequence":"additional","affiliation":[{"name":"Department of Paediatrics and Adolescent Medicine, Li Ka Shing Faculty of Medicine, University of Hong Kong, Hong Kong, SAR China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yu Lung","family":"Lau","sequence":"additional","affiliation":[{"name":"Department of Paediatrics and Adolescent Medicine, Li Ka Shing Faculty of Medicine, University of Hong Kong, Hong Kong, SAR China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xuejun","family":"Zhang","sequence":"additional","affiliation":[{"name":"Department of Dermatology, No. 1 Hospital and Key Laboratory of Dermatology, Ministry of Education, Anhui Medical University, Hefei, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yujun","family":"Sheng","sequence":"additional","affiliation":[{"name":"Department of Dermatology, No. 1 Hospital and Key Laboratory of Dermatology, Ministry of Education, Anhui Medical University, Hefei, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wanling","family":"Yang","sequence":"additional","affiliation":[{"name":"Department of Paediatrics and Adolescent Medicine, Li Ka Shing Faculty of Medicine, University of Hong Kong, Hong Kong, SAR China"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2018,8,31]]},"reference":[{"key":"2023013107275102200_bty730-B1","doi-asserted-by":"crossref","first-page":"e97282.","DOI":"10.1371\/journal.pone.0097282","article-title":"HLA diversity in the 1000 genomes dataset","volume":"9","author":"Gourraud","year":"2014","journal-title":"PLoS One"},{"key":"2023013107275102200_bty730-B2","doi-asserted-by":"crossref","first-page":"530","DOI":"10.1038\/tpj.2015.4","article-title":"High-accuracy imputation for HLA class I and II genes based on high-resolution SNP data of population-specific references","volume":"15","author":"Khor","year":"2015","journal-title":"Pharmacogenomics J"},{"key":"2023013107275102200_bty730-B3","doi-asserted-by":"crossref","first-page":"798","DOI":"10.1038\/ng.3310","article-title":"Construction of a population-specific HLA imputation reference panel and its application to Graves' disease risk in Japanese","volume":"47","author":"Okada","year":"2015","journal-title":"Nat. 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