{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,9]],"date-time":"2026-03-09T07:12:31Z","timestamp":1773040351259,"version":"3.50.1"},"reference-count":18,"publisher":"Oxford University Press (OUP)","issue":"6","license":[{"start":{"date-parts":[[2018,8,28]],"date-time":"2018-08-28T00:00:00Z","timestamp":1535414400000},"content-version":"vor","delay-in-days":2,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"name":"BBMRI-NL"},{"name":"Netherlands Organization for Scientific Research"},{"DOI":"10.13039\/501100003246","name":"NWO","doi-asserted-by":"publisher","award":["184.033.111"],"award-info":[{"award-number":["184.033.111"]}],"id":[{"id":"10.13039\/501100003246","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100003246","name":"NWO","doi-asserted-by":"publisher","award":["917.164.455"],"award-info":[{"award-number":["917.164.455"]}],"id":[{"id":"10.13039\/501100003246","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2019,3,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:sec>\n                  <jats:title>Motivation<\/jats:title>\n                  <jats:p>The volume and complexity of biological data increases rapidly. Many clinical professionals and biomedical researchers without a bioinformatics background are generating big \u2019-omics\u2019 data, but do not always have the tools to manage, process or publicly share these data.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Results<\/jats:title>\n                  <jats:p>Here we present MOLGENIS Research, an open-source web-application to collect, manage, analyze, visualize and share large and complex biomedical datasets, without the need for advanced bioinformatics skills.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Availability and implementation<\/jats:title>\n                  <jats:p>MOLGENIS Research is freely available (open source software). It can be installed from source code (see http:\/\/github.com\/molgenis), downloaded as a precompiled WAR file (for your own server), setup inside a Docker container (see http:\/\/molgenis.github.io), or requested as a Software-as-a-Service subscription. For a public demo instance and complete installation instructions see http:\/\/molgenis.org\/research.<\/jats:p>\n               <\/jats:sec>","DOI":"10.1093\/bioinformatics\/bty742","type":"journal-article","created":{"date-parts":[[2018,8,26]],"date-time":"2018-08-26T11:10:48Z","timestamp":1535281848000},"page":"1076-1078","source":"Crossref","is-referenced-by-count":92,"title":["MOLGENIS research: advanced bioinformatics data software for non-bioinformaticians"],"prefix":"10.1093","volume":"35","author":[{"given":"K Joeri","family":"van der Velde","sequence":"first","affiliation":[{"name":"Genomics Coordination Center, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"},{"name":"Department of Genetics, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Floris","family":"Imhann","sequence":"additional","affiliation":[{"name":"Department of Genetics, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"},{"name":"Department of Gastroenterology and Hepatology, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Bart","family":"Charbon","sequence":"additional","affiliation":[{"name":"Genomics Coordination Center, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9308-8790","authenticated-orcid":false,"given":"Chao","family":"Pang","sequence":"additional","affiliation":[{"name":"Genomics Coordination Center, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"David","family":"van Enckevort","sequence":"additional","affiliation":[{"name":"Genomics Coordination Center, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mariska","family":"Slofstra","sequence":"additional","affiliation":[{"name":"Genomics Coordination Center, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ruggero","family":"Barbieri","sequence":"additional","affiliation":[{"name":"Department of Genetics, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"},{"name":"Department of Gastroenterology and Hepatology, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Rudi","family":"Alberts","sequence":"additional","affiliation":[{"name":"Department of Genetics, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"},{"name":"Department of Gastroenterology and Hepatology, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Dennis","family":"Hendriksen","sequence":"additional","affiliation":[{"name":"Genomics Coordination Center, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Fleur","family":"Kelpin","sequence":"additional","affiliation":[{"name":"Genomics Coordination Center, University of Groningen and University Medical Center Groningen, Groningen, The 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University Medical Center Groningen, Groningen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Salome","family":"Scholtens","sequence":"additional","affiliation":[{"name":"Genomics Coordination Center, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Gert-Jan","family":"van de Geijn","sequence":"additional","affiliation":[{"name":"Genomics Coordination Center, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Eleonora A M","family":"Festen","sequence":"additional","affiliation":[{"name":"Department of Genetics, University of Groningen and University Medical Center Groningen, Groningen, The Netherlands"},{"name":"Department of Gastroenterology and Hepatology, University of Groningen and University Medical Center Groningen, Groningen, The 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