{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,12,20]],"date-time":"2025-12-20T22:26:44Z","timestamp":1766269604938,"version":"3.37.3"},"reference-count":10,"publisher":"Oxford University Press (OUP)","issue":"4","license":[{"start":{"date-parts":[[2019,9,3]],"date-time":"2019-09-03T00:00:00Z","timestamp":1567468800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/journals\/pages\/open_access\/funder_policies\/chorus\/standard_publication_model"}],"funder":[{"DOI":"10.13039\/501100012166","name":"National Key R&D Program of China","doi-asserted-by":"crossref","award":["2018YFC0910405"],"award-info":[{"award-number":["2018YFC0910405"]}],"id":[{"id":"10.13039\/501100012166","id-type":"DOI","asserted-by":"crossref"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["NSFC 61872268","31771471"],"award-info":[{"award-number":["NSFC 61872268","31771471"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Natural Science Foundation for Distinguished Young Scholar of Hebei Province","award":["C2017209244"],"award-info":[{"award-number":["C2017209244"]}]},{"name":"CAS Key Lab of Network Data Science and Technology, Institute of Computing Technology, Chinese Academy of Sciences","award":["CASNDST201705"],"award-info":[{"award-number":["CASNDST201705"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2020,2,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:sec>\n                  <jats:title>Summary<\/jats:title>\n                  <jats:p>Many efforts have been made in developing bioinformatics algorithms to predict functional attributes of genes and proteins from their primary sequences. One challenge in this process is to intuitively analyze and to understand the statistical features that have been selected by heuristic or iterative methods. In this paper, we developed VisFeature, which aims to be a helpful software tool that allows the users to intuitively visualize and analyze statistical features of all types of biological sequence, including DNA, RNA and proteins. VisFeature also integrates sequence data retrieval, multiple sequence alignments and statistical feature generation functions.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Availability and implementation<\/jats:title>\n                  <jats:p>VisFeature is a desktop application that is implemented using JavaScript\/Electron and R. The source codes of VisFeature are freely accessible from the GitHub repository (https:\/\/github.com\/wangjun1996\/VisFeature). The binary release, which includes an example dataset, can be freely downloaded from the same GitHub repository (https:\/\/github.com\/wangjun1996\/VisFeature\/releases).<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Supplementary information<\/jats:title>\n                  <jats:p>Supplementary data are available at Bioinformatics online.<\/jats:p>\n               <\/jats:sec>","DOI":"10.1093\/bioinformatics\/btz689","type":"journal-article","created":{"date-parts":[[2019,8,30]],"date-time":"2019-08-30T11:48:44Z","timestamp":1567165724000},"page":"1277-1278","source":"Crossref","is-referenced-by-count":15,"title":["VisFeature: a stand-alone program for visualizing and analyzing statistical features of biological sequences"],"prefix":"10.1093","volume":"36","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-0433-1870","authenticated-orcid":false,"given":"Jun","family":"Wang","sequence":"first","affiliation":[{"name":"College of Intelligence and Computing, Tianjin University , Tianjin 300350, China"}]},{"given":"Pu-Feng","family":"Du","sequence":"additional","affiliation":[{"name":"College of Intelligence and Computing, Tianjin University , Tianjin 300350, China"}]},{"given":"Xin-Yu","family":"Xue","sequence":"additional","affiliation":[{"name":"College of Intelligence and Computing, Tianjin University , Tianjin 300350, China"}]},{"given":"Guang-Ping","family":"Li","sequence":"additional","affiliation":[{"name":"College of Intelligence and Computing, Tianjin University , Tianjin 300350, China"}]},{"given":"Yuan-Ke","family":"Zhou","sequence":"additional","affiliation":[{"name":"College of Intelligence and Computing, Tianjin University , Tianjin 300350, China"}]},{"given":"Wei","family":"Zhao","sequence":"additional","affiliation":[{"name":"College of Intelligence and Computing, Tianjin University , Tianjin 300350, China"}]},{"given":"Hao","family":"Lin","sequence":"additional","affiliation":[{"name":"Key Laboratory for Neuro-Information of Ministry of Education, School of Life Science and Technology, Center for Informational Biology, University of Electronic Science and Technology of China , Chengdu 610054, China"}]},{"given":"Wei","family":"Chen","sequence":"additional","affiliation":[{"name":"Innovative Institute of Chinese Medicine and Pharmacy, Chengdu University of Traditional Chinese Medicine , Chengdu 611137, China"},{"name":"Center for Genomics and Computational Biology, School of Life Sciences, North China University of Science and Technology , Tangshan 063000, China"}]}],"member":"286","published-online":{"date-parts":[[2019,9,3]]},"reference":[{"key":"2023013110145539900_btz689-B1","doi-asserted-by":"crossref","first-page":"119","DOI":"10.1093\/bioinformatics\/btu602","article-title":"PseKNC-General: a cross-platform package for generating various modes of pseudo nucleotide compositions","volume":"31","author":"Chen","year":"2015","journal-title":"Bioinformatics"},{"key":"2023013110145539900_btz689-B2","doi-asserted-by":"crossref","first-page":"3495","DOI":"10.3390\/ijms15033495","article-title":"PseAAC-General: fast building various modes of general form of Chou\u2019s pseudo-amino acid composition for large-scale protein datasets","volume":"15","author":"Du","year":"2014","journal-title":"Int. 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