{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,26]],"date-time":"2026-02-26T20:36:49Z","timestamp":1772138209452,"version":"3.50.1"},"reference-count":23,"publisher":"Oxford University Press (OUP)","license":[{"start":{"date-parts":[[2017,9,19]],"date-time":"2017-09-19T00:00:00Z","timestamp":1505779200000},"content-version":"vor","delay-in-days":261,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["NS058901"],"award-info":[{"award-number":["NS058901"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["NS098819"],"award-info":[{"award-number":["NS098819"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2017,1,1]]},"DOI":"10.1093\/database\/bax071","type":"journal-article","created":{"date-parts":[[2017,9,12]],"date-time":"2017-09-12T15:09:48Z","timestamp":1505228988000},"source":"Crossref","is-referenced-by-count":12,"title":["SFMetaDB: a comprehensive annotation of mouse RNA splicing factor RNA-Seq datasets"],"prefix":"10.1093","volume":"2017","author":[{"given":"Jin","family":"Li","sequence":"first","affiliation":[{"name":"Department of Electrical and Computer Engineering"},{"name":"TEES-AgriLife Center for Bioinformatics and Genomic Systems Engineering, Texas A&M University, College Station, TX 77843, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ching-San","family":"Tseng","sequence":"additional","affiliation":[{"name":"Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Antonio","family":"Federico","sequence":"additional","affiliation":[{"name":"Institute of Genetics and Biophysics \u201cAdriano Buzzati Traverso\u201d, CNR, Naples, Italy"},{"name":"Department of Science and Technology, University of Naples \u201cParthenope\u201d, Naples, Italy"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Franjo","family":"Ivankovic","sequence":"additional","affiliation":[{"name":"Department of Molecular Genetics and Microbiology, Center for NeuroGenetics and the Genetics Institute, College of Medicine, University of Florida, Gainesville, Florida, USA."}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yi-Shuian","family":"Huang","sequence":"additional","affiliation":[{"name":"Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Alfredo","family":"Ciccodicola","sequence":"additional","affiliation":[{"name":"Institute of Genetics and Biophysics \u201cAdriano Buzzati Traverso\u201d, CNR, Naples, Italy"},{"name":"Department of Science and Technology, University of Naples \u201cParthenope\u201d, Naples, Italy"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Maurice S.","family":"Swanson","sequence":"additional","affiliation":[{"name":"Department of Molecular Genetics and Microbiology, Center for NeuroGenetics and the Genetics Institute, College of Medicine, University of Florida, Gainesville, Florida, USA."}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Peng","family":"Yu","sequence":"additional","affiliation":[{"name":"Department of Electrical and Computer Engineering"},{"name":"TEES-AgriLife Center for Bioinformatics and Genomic Systems Engineering, Texas A&M University, College Station, TX 77843, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2017,9,19]]},"reference":[{"key":"key\n\t\t\t\t20180618190911_bax071-B1","doi-asserted-by":"crossref","first-page":"D1113","DOI":"10.1093\/nar\/gku1057","article-title":"ArrayExpress update-simplifying data submissions","volume":"43","author":"Kolesnikov","year":"2015","journal-title":"Nucleic Acids Res"},{"key":"key\n\t\t\t\t20180618190911_bax071-B2","doi-asserted-by":"crossref","first-page":"207","DOI":"10.1093\/nar\/30.1.207","article-title":"Gene Expression Omnibus: NCBI gene expression and hybridization array data repository","volume":"30","author":"Edgar","year":"2002","journal-title":"Nucleic Acids Res"},{"key":"key\n\t\t\t\t20180618190911_bax071-B3","doi-asserted-by":"crossref","first-page":"D595","DOI":"10.1093\/nar\/gkv1195","article-title":"EBI metagenomics in 2016\u2014an expanding and evolving resource for the analysis and archiving of metagenomic data","volume":"44","author":"Mitchell","year":"2016","journal-title":"Nucleic Acids Res"},{"key":"key\n\t\t\t\t20180618190911_bax071-B4","doi-asserted-by":"crossref","first-page":"1411","DOI":"10.1093\/bioinformatics\/bts157","article-title":"CistromeMap: a knowledgebase and web server for ChIP-Seq and DNase-Seq studies in mouse and human","volume":"28","author":"Qin","year":"2012","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t20180618190911_bax071-B5","doi-asserted-by":"crossref","first-page":"D746","DOI":"10.1093\/nar\/gkv1045","article-title":"Expression Atlas update\u2014an integrated database of gene and protein expression in humans, animals and plants","volume":"44","author":"Petryszak","year":"2016","journal-title":"Nucleic Acids Res"},{"key":"key\n\t\t\t\t20180618190911_bax071-B6","doi-asserted-by":"crossref","first-page":"4038","DOI":"10.1093\/bioinformatics\/btv503","article-title":"RNASeqMetaDB: a database and web server for navigating metadata of publicly available mouse RNA-Seq datasets","volume":"31","author":"Guo","year":"2015","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t20180618190911_bax071-B7","doi-asserted-by":"crossref","first-page":"342","DOI":"10.1016\/j.stem.2014.01.009","article-title":"CD44v6 is a marker of constitutive and reprogrammed cancer stem cells driving colon cancer metastasis","volume":"14","author":"Todaro","year":"2014","journal-title":"Cell Stem Cell"},{"key":"key\n\t\t\t\t20180618190911_bax071-B8","doi-asserted-by":"crossref","first-page":"2630","DOI":"10.1158\/0008-5472.CAN-13-2309","article-title":"CD44v8-10 is a cancer-specific marker for gastric cancer stem cells","volume":"74","author":"Lau","year":"2014","journal-title":"Cancer Res"},{"key":"key\n\t\t\t\t20180618190911_bax071-B9","doi-asserted-by":"crossref","first-page":"1122","DOI":"10.1002\/hep.27923","article-title":"Alternative splicing of the cell fate determinant Numb in hepatocellular carcinoma","volume":"62","author":"Lu","year":"2015","journal-title":"Hepatology"},{"key":"key\n\t\t\t\t20180618190911_bax071-B10","doi-asserted-by":"crossref","first-page":"760","DOI":"10.1016\/j.molcel.2016.10.001","article-title":"A MICU1 splice variant confers high sensitivity to the mitochondrial Ca2+ uptake machinery of skeletal muscle","volume":"64","author":"Vecellio Reane","year":"2016","journal-title":"Mol. Cell"},{"key":"key\n\t\t\t\t20180618190911_bax071-B11","doi-asserted-by":"crossref","first-page":"3056","DOI":"10.1016\/j.jmb.2015.08.004","article-title":"Analysis of a FANCE splice isoform in regard to DNA repair","volume":"427","author":"Bouffard","year":"2015","journal-title":"J. Mol. Biol"},{"key":"key\n\t\t\t\t20180618190911_bax071-B12","doi-asserted-by":"crossref","first-page":"186","DOI":"10.1016\/j.nbd.2016.09.009","article-title":"The control of alternative splicing by SRSF1 in myelinated afferents contributes to the development of neuropathic pain","volume":"96","author":"Hulse","year":"2016","journal-title":"Neurobiol. Dis"},{"key":"key\n\t\t\t\t20180618190911_bax071-B13","doi-asserted-by":"crossref","first-page":"23","DOI":"10.1016\/j.molcel.2014.10.029","article-title":"Genome-wide identification of Fas\/CD95 alternative splicing regulators reveals links with iron homeostasis","volume":"57","author":"Tejedor","year":"2015","journal-title":"Mol. Cell"},{"key":"key\n\t\t\t\t20180618190911_bax071-B14","doi-asserted-by":"crossref","first-page":"311","DOI":"10.1002\/wrna.1276","article-title":"Functional roles of alternative splicing factors in human disease","volume":"6","author":"Cieply","year":"2015","journal-title":"Wiley Interdiscip. Rev. RNA"},{"key":"key\n\t\t\t\t20180618190911_bax071-B15","doi-asserted-by":"crossref","first-page":"11818","DOI":"10.1093\/nar\/gku861","article-title":"Nova1 is a master regulator of alternative splicing in pancreatic beta cells","volume":"42","author":"Villate","year":"2014","journal-title":"Nucleic Acids Res"},{"key":"key\n\t\t\t\t20180618190911_bax071-B16","doi-asserted-by":"crossref","first-page":"e14371","DOI":"10.7554\/eLife.14371","article-title":"NOVA2-mediated RNA regulation is required for axonal pathfinding during development","volume":"5","author":"Saito","year":"2016","journal-title":"Elife"},{"key":"key\n\t\t\t\t20180618190911_bax071-B17","doi-asserted-by":"crossref","first-page":"e09268.","DOI":"10.7554\/eLife.09268","article-title":"The splicing regulator PTBP1 controls the activity of the transcription factor Pbx1 during neuronal differentiation","volume":"4","author":"Linares","year":"2015","journal-title":"Elife"},{"key":"key\n\t\t\t\t20180618190911_bax071-B18","doi-asserted-by":"crossref","first-page":"1760","DOI":"10.1093\/nar\/gkw1158","article-title":"Autoregulation of MBNL1 function by exon 1 exclusion from MBNL1 transcript","volume":"45","author":"Konieczny","year":"2017","journal-title":"Nucleic Acids Res"},{"key":"key\n\t\t\t\t20180618190911_bax071-B19","doi-asserted-by":"crossref","first-page":"D204","DOI":"10.1093\/nar\/gku989","article-title":"UniProt: a hub for protein information","volume":"43","author":"UniProt","year":"2015","journal-title":"Nucleic Acids Res"},{"key":"key\n\t\t\t\t20180618190911_bax071-B20","doi-asserted-by":"crossref","first-page":"D279","DOI":"10.1093\/nar\/gkv1344","article-title":"The Pfam protein families database: towards a more sustainable future","volume":"44","author":"Finn","year":"2016","journal-title":"Nucleic Acids Res"},{"key":"key\n\t\t\t\t20180618190911_bax071-B21","doi-asserted-by":"crossref","first-page":"448","DOI":"10.1007\/s00335-015-9600-0","article-title":"The International Mouse Strain Resource (IMSR): cataloging worldwide mouse and ES cell line resources","volume":"26","author":"Eppig","year":"2015","journal-title":"Mamm. Genome"},{"key":"key\n\t\t\t\t20180618190911_bax071-B22","doi-asserted-by":"crossref","first-page":"25","DOI":"10.1038\/75556","article-title":"Gene ontology: tool for the unification of biology. The Gene Ontology Consortium","volume":"25","author":"Ashburner","year":"2000","journal-title":"Nat. Genet"},{"key":"key\n\t\t\t\t20180618190911_bax071-B23","doi-asserted-by":"crossref","first-page":"27","DOI":"10.1093\/nar\/28.1.27","article-title":"KEGG: kyoto encyclopedia of genes and genomes","volume":"28","author":"Kanehisa","year":"2000","journal-title":"Nucleic Acids Res"}],"container-title":["Database"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/database\/article-pdf\/doi\/10.1093\/database\/bax071\/23416964\/bax071.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,8,25]],"date-time":"2023-08-25T14:59:46Z","timestamp":1692975586000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/database\/article\/doi\/10.1093\/database\/bax071\/4161772"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,1,1]]},"references-count":23,"URL":"https:\/\/doi.org\/10.1093\/database\/bax071","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/177931","asserted-by":"object"}]},"ISSN":["1758-0463"],"issn-type":[{"value":"1758-0463","type":"electronic"}],"subject":[],"published-other":{"date-parts":[[2017]]},"published":{"date-parts":[[2017,1,1]]}}}