{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,2,21]],"date-time":"2025-02-21T16:38:10Z","timestamp":1740155890296,"version":"3.37.3"},"reference-count":22,"publisher":"Oxford University Press (OUP)","license":[{"start":{"date-parts":[[2018,6,4]],"date-time":"2018-06-04T00:00:00Z","timestamp":1528070400000},"content-version":"vor","delay-in-days":154,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100004663","name":"Ministry of Science and Technology of Taiwan","doi-asserted-by":"publisher","award":["MOST-105-2221-E-143-003","MOST-106-2221-E-143-007-MY3"],"award-info":[{"award-number":["MOST-105-2221-E-143-003","MOST-106-2221-E-143-007-MY3"]}],"id":[{"id":"10.13039\/501100004663","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2018,1,1]]},"DOI":"10.1093\/database\/bay048","type":"journal-article","created":{"date-parts":[[2018,5,1]],"date-time":"2018-05-01T07:07:39Z","timestamp":1525158459000},"source":"Crossref","is-referenced-by-count":4,"title":["SPRENO: a BioC module for identifying organism terms in figure captions"],"prefix":"10.1093","volume":"2018","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-1516-7255","authenticated-orcid":false,"given":"Hong-Jie","family":"Dai","sequence":"first","affiliation":[{"name":"Department of Computer Science and Information Engineering, National Taitung University, 369, Sec. 2, University Rd., Taitung, Taiwan, R.O.C"},{"name":"Interdisciplinary Program of Green and Information Technology, National Taitung University, 369, Sec. 2, University Rd., Taitung, Taiwan, R.O.C"}]},{"given":"Onkar","family":"Singh","sequence":"additional","affiliation":[{"name":"Bioinformatics Program, Taiwan International Graduate Program, Institute of Information Science, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei, Taiwan, R.O.C"},{"name":"Institute of Biomedical Informatics, National Yang-Ming University, No. 155, Sec. 2, Linong Street, Taipei, 112 Taiwan, R.O.C"}]}],"member":"286","published-online":{"date-parts":[[2018,6,3]]},"reference":[{"key":"key\n\t\t\t\t2019010806584281400_bay048-B1","doi-asserted-by":"crossref","first-page":"1021","DOI":"10.1038\/nmeth.4471","article-title":"SourceData: a semantic platform for curating and searching figures","volume":"14","author":"Liechti","year":"2017","journal-title":"Nat. Methods"},{"first-page":"28","year":"2017","author":"Arighi","key":"key\n\t\t\t\t2019010806584281400_bay048-B2"},{"key":"key\n\t\t\t\t2019010806584281400_bay048-B3","article-title":"Collective instance-level gene normalization on the IGN corpus","volume":"9","author":"Dai","year":"2013","journal-title":"PLoS One"},{"key":"key\n\t\t\t\t2019010806584281400_bay048-B4","doi-asserted-by":"crossref","first-page":"e38460","DOI":"10.1371\/journal.pone.0038460","article-title":"SR4GN: a species recognition software tool for gene normalization","volume":"7","author":"Wei","year":"2012","journal-title":"PLoS One"},{"key":"key\n\t\t\t\t2019010806584281400_bay048-B5","doi-asserted-by":"crossref","first-page":"baw111","DOI":"10.1093\/database\/baw111","article-title":"NTTMUNSW BioC modules for recognizing and normalizing species and gene\/protein mentions","volume":"2016","author":"Dai","year":"2016","journal-title":"Database"},{"key":"key\n\t\t\t\t2019010806584281400_bay048-B6","doi-asserted-by":"crossref","first-page":"baw121","DOI":"10.1093\/database\/baw121","article-title":"BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID","volume":"2016","author":"Kim","year":"2016","journal-title":"Database"},{"key":"key\n\t\t\t\t2019010806584281400_bay048-B7","doi-asserted-by":"crossref","first-page":"e65390","DOI":"10.1371\/journal.pone.0065390","article-title":"The SPECIES and ORGANISMS resources for fast and accurate identification of taxonomic names in text","volume":"8","author":"Pafilis","year":"2013","journal-title":"PLoS One"},{"key":"key\n\t\t\t\t2019010806584281400_bay048-B8","doi-asserted-by":"crossref","first-page":"2721","DOI":"10.1093\/bioinformatics\/btr452","article-title":"OrganismTagger: detection, normalization and grounding of organism entities in biomedical documents","volume":"27","author":"Naderi","year":"2011","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t2019010806584281400_bay048-B9","doi-asserted-by":"crossref","first-page":"baw147","DOI":"10.1093\/database\/baw147","article-title":"The BioC-BioGRID corpus: full text articles annotated for curation of protein\u2013protein and genetic interactions","volume":"2017","author":"Islamaj Do\u011fan","year":"2017","journal-title":"Database"},{"year":"2008","key":"key\n\t\t\t\t2019010806584281400_bay048-B10"},{"year":"2006","author":"Teteisi","key":"key\n\t\t\t\t2019010806584281400_bay048-B11"},{"year":"2003","author":"Schwartz","key":"key\n\t\t\t\t2019010806584281400_bay048-B12"},{"key":"key\n\t\t\t\t2019010806584281400_bay048-B13","doi-asserted-by":"crossref","first-page":"412","DOI":"10.1109\/TCBB.2010.45","article-title":"Multistage gene normalization and SVM-based ranking for protein interactor extraction in full-text articles","volume":"7","author":"Dai","year":"2010","journal-title":"IEEE\/ACM Trans Comput Biol Bioinformatics"},{"key":"key\n\t\t\t\t2019010806584281400_bay048-B14","doi-asserted-by":"crossref","first-page":"2586","DOI":"10.1093\/bioinformatics\/btr358","article-title":"Integration of gene normalization stages and co-reference resolution using a Markov logic network","volume":"27","author":"Dai","year":"2011","journal-title":"Bioinformatics"},{"year":"2015","author":"Sun","key":"key\n\t\t\t\t2019010806584281400_bay048-B15"},{"year":"2013","author":"Moen","key":"key\n\t\t\t\t2019010806584281400_bay048-B16"},{"first-page":"24","year":"2017","author":"Sheng","key":"key\n\t\t\t\t2019010806584281400_bay048-B17"},{"first-page":"32","year":"2017","author":"Kaewphan","key":"key\n\t\t\t\t2019010806584281400_bay048-B18"},{"year":"2017","author":"Chang","key":"key\n\t\t\t\t2019010806584281400_bay048-B19"},{"key":"key\n\t\t\t\t2019010806584281400_bay048-B20","doi-asserted-by":"crossref","first-page":"17","DOI":"10.1186\/1758-2946-6-17","article-title":"Chemical named entities recognition: a review on approaches and applications","volume":"6","author":"Eltyeb","year":"2014","journal-title":"J Cheminformatics"},{"year":"2017","author":"Yang","key":"key\n\t\t\t\t2019010806584281400_bay048-B21"},{"key":"key\n\t\t\t\t2019010806584281400_bay048-B22","first-page":"56","volume-title":"AMIA Summit on Translational Bioinformatics","author":"Jonquet","year":"2009"}],"container-title":["Database"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/database\/article-pdf\/doi\/10.1093\/database\/bay048\/27438230\/bay048.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,10,17]],"date-time":"2019-10-17T04:21:23Z","timestamp":1571286083000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/database\/article\/doi\/10.1093\/database\/bay048\/5032611"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,1,1]]},"references-count":22,"URL":"https:\/\/doi.org\/10.1093\/database\/bay048","relation":{},"ISSN":["1758-0463"],"issn-type":[{"type":"electronic","value":"1758-0463"}],"subject":[],"published-other":{"date-parts":[[2018]]},"published":{"date-parts":[[2018,1,1]]}}}