{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,18]],"date-time":"2026-10-18T11:23:20Z","timestamp":1792322600855,"version":"4.4.0"},"reference-count":31,"publisher":"Oxford University Press (OUP)","license":[{"start":{"date-parts":[[2018,7,18]],"date-time":"2018-07-18T00:00:00Z","timestamp":1531872000000},"content-version":"vor","delay-in-days":198,"URL":"https:\/\/academic.oup.com\/journals\/pages\/about_us\/legal\/notices"}],"funder":[{"DOI":"10.13039\/100000092","name":"National Library of Medicine","doi-asserted-by":"crossref","award":["R21LM012274"],"award-info":[{"award-number":["R21LM012274"]}],"id":[{"id":"10.13039\/100000092","id-type":"DOI","asserted-by":"crossref"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2018,1,1]]},"DOI":"10.1093\/database\/bay073","type":"journal-article","created":{"date-parts":[[2018,6,28]],"date-time":"2018-06-28T23:08:27Z","timestamp":1530227307000},"source":"Crossref","is-referenced-by-count":95,"title":["Extracting chemical\u2013protein relations with ensembles of SVM and deep learning models"],"prefix":"10.1093","volume":"2018","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-9309-8331","authenticated-orcid":false,"given":"Yifan","family":"Peng","sequence":"first","affiliation":[{"name":"National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Anthony","family":"Rios","sequence":"additional","affiliation":[{"name":"National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA"},{"name":"Department of Computer Science, University of Kentucky, Lexington, KY, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ramakanth","family":"Kavuluru","sequence":"additional","affiliation":[{"name":"Department of Computer Science, University of Kentucky, Lexington, KY, USA"},{"name":"Division of Biomedical Informatics Department of Internal Medicine, University of Kentucky, Lexington, KY, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Zhiyong","family":"Lu","sequence":"additional","affiliation":[{"name":"National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2018,7,17]]},"reference":[{"key":"key\n\t\t\t\t2019010807081086600_bay073-B1","first-page":"141","volume-title":"Proceedings of the BioCreative VI Workshop","author":"Krallinger","year":"2017"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B2","doi-asserted-by":"crossref","DOI":"10.1007\/978-1-4757-2440-0","volume-title":"The Nature of Statistical Learning Theory","author":"Vapnik","year":"1995"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B3","first-page":"121","volume-title":"A Rich Feature Vector for Protein-Protein Interaction Extraction from Multiple Corpora","author":"Miwa","year":"2009"},{"issue":"141","key":"key\n\t\t\t\t2019010807081086600_bay073-B4","doi-asserted-by":"crossref","first-page":"20170387","DOI":"10.1098\/rsif.2017.0387","article-title":"Opportunities and obstacles for deep learning in biology and medicine","volume":"15","author":"Ching","year":"2018","journal-title":"J. R. Soc. Interface"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B5","doi-asserted-by":"crossref","first-page":"29","DOI":"10.18653\/v1\/W17-2304","article-title":"Deep learning for extracting protein-protein interactions from biomedical literature","author":"Peng","year":"2017","journal-title":"BioNLP 2017"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B6","doi-asserted-by":"crossref","first-page":"8479587","DOI":"10.1155\/2016\/8479587","article-title":"A shortest dependency path based convolutional neural network for protein-protein relation extraction","volume":"2016","author":"Hua","year":"2016","journal-title":"BioMed Res. Int"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B7","doi-asserted-by":"crossref","first-page":"bax024","DOI":"10.1093\/database\/bax024","article-title":"Chemical-induced disease relation extraction via convolutional neural network","volume":"2017","author":"Gu","year":"2017","journal-title":"Database (Oxford)"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B8","first-page":"554","volume-title":"Drug-drug interaction extraction via recurrent neural network with multiple attention layers","author":"Yi","year":"2017"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B9","author":"Kavuluru","year":"2017"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B10","first-page":"147","author":"Peng","year":"2017"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B11","first-page":"151","author":"Matos","year":"2017"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B12","first-page":"155","author":"Liu"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B13","first-page":"171","author":"Wang","year":"2017"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B14","first-page":"175","author":"Mehryary","year":"2017"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B15","first-page":"184","author":"Y\u00fcksel","year":"2017"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B16","first-page":"190","author":"Lim","year":"2017"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B17","first-page":"173","author":"Li"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B18","author":"Wei","year":"2016"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B19","doi-asserted-by":"crossref","first-page":"baw065.","DOI":"10.1093\/database\/baw065","article-title":"Mining chemical patents with an ensemble of open systems","volume":"2016","author":"Leaman","year":"2016","journal-title":"Database (Oxford)"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B20","author":"Grassmann","year":"2018"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B21","doi-asserted-by":"crossref","first-page":"baw065.","DOI":"10.1093\/database\/baw065","article-title":"Mining chemical patents with an ensemble of open systems","volume":"2016","author":"Leaman","year":"2016","journal-title":"Database"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B22","doi-asserted-by":"crossref","first-page":"2278","DOI":"10.1109\/5.726791","article-title":"Gradient-based learning applied to document recognition","volume":"86","author":"Lecun","year":"1998","journal-title":"Proc. IEEE"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B23","doi-asserted-by":"crossref","first-page":"1735","DOI":"10.1162\/neco.1997.9.8.1735","article-title":"Long short-term memory","volume":"9","author":"Hochreiter","year":"1997","journal-title":"Neural Comput"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B24","first-page":"467","author":"Tsuruoka","year":"2005"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B25","doi-asserted-by":"crossref","first-page":"118","DOI":"10.1093\/bioinformatics\/btm544","article-title":"Kernel approaches for genic interaction extraction","volume":"24","author":"Kim","year":"2008","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B26","first-page":"1","author":"Mikolov","year":"2013"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B27","author":"McClosky","year":"2010"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B28","first-page":"132","author":"Charniak","year":"2000"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B29","first-page":"4585","volume-title":"Universal Stanford Dependencies: A Cross-Linguistic Typology","author":"De Marneffe","year":"2014"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B30","author":"Kingma","year":"2015"},{"key":"key\n\t\t\t\t2019010807081086600_bay073-B31","first-page":"626","author":"dos Santos","year":"2015"}],"container-title":["Database"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/database\/article-pdf\/doi\/10.1093\/database\/bay073\/27438788\/bay073.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,10,20]],"date-time":"2019-10-20T00:24:49Z","timestamp":1571531089000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/database\/article\/doi\/10.1093\/database\/bay073\/5055578"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,1,1]]},"references-count":31,"URL":"https:\/\/doi.org\/10.1093\/database\/bay073","relation":{},"ISSN":["1758-0463"],"issn-type":[{"value":"1758-0463","type":"electronic"}],"subject":[],"published-other":{"date-parts":[[2018]]},"published":{"date-parts":[[2018,1,1]]}}}