{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,6,12]],"date-time":"2026-06-12T01:27:45Z","timestamp":1781227665337,"version":"3.54.1"},"reference-count":75,"publisher":"Oxford University Press (OUP)","issue":"1","license":[{"start":{"date-parts":[[2023,12,13]],"date-time":"2023-12-13T00:00:00Z","timestamp":1702425600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2024,5,9]]},"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:p>The order Acipenseriformes, which includes sturgeons and paddlefishes, represents \u201cliving fossils\u201d with complex genomes that are good models for understanding whole-genome duplication (WGD) and ploidy evolution in fishes. Here, we sequenced and assembled the first high-quality chromosome-level genome for the complex octoploid Acipenser sinensis (Chinese sturgeon), a critically endangered species that also represents a poorly understood ploidy group in Acipenseriformes. Our results show that A. sinensis is a complex autooctoploid species containing four kinds of octovalents (8n), a hexavalent (6n), two tetravalents (4n), and a divalent (2n). An analysis taking into account delayed rediploidization reveals that the octoploid genome composition of Chinese sturgeon results from two rounds of homologous WGDs, and further provides insights into the timing of its ploidy evolution. This study provides the first octoploid genome resource of Acipenseriformes for understanding ploidy compositions and evolutionary trajectories of polyploid fishes.<\/jats:p>","DOI":"10.1093\/gpbjnl\/qzad002","type":"journal-article","created":{"date-parts":[[2024,1,9]],"date-time":"2024-01-09T19:14:43Z","timestamp":1704827683000},"source":"Crossref","is-referenced-by-count":17,"title":["Whole-genome Sequencing Reveals Autooctoploidy in Chinese Sturgeon and Its Evolutionary Trajectories"],"prefix":"10.1093","volume":"22","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-1165-2701","authenticated-orcid":false,"given":"Binzhong","family":"Wang","sequence":"first","affiliation":[{"name":"Hubei Key Laboratory of Three Gorges Project for Conservation of Fishes , Yichang 443100,","place":["China"]},{"name":"Chinese Sturgeon Research Institute, China Three Gorges Corporation , Yichang 443100,","place":["China"]},{"name":"Yangtze River Biodiversity Research Center, China Three Gorges Corporation , Wuhan 430014,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-7507-9970","authenticated-orcid":false,"given":"Bin","family":"Wu","sequence":"additional","affiliation":[{"name":"BGI-Shenzhen , Shenzhen 518083,","place":["China"]},{"name":"BGI Genomics, BGI-Shenzhen , Shenzhen 518083,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0329-1398","authenticated-orcid":false,"given":"Xueqing","family":"Liu","sequence":"additional","affiliation":[{"name":"Hubei Key Laboratory of Three Gorges Project for Conservation of Fishes , Yichang 443100,","place":["China"]},{"name":"Chinese Sturgeon Research Institute, China Three Gorges Corporation , Yichang 443100,","place":["China"]},{"name":"Yangtze River Biodiversity Research Center, China Three Gorges Corporation , Wuhan 430014,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4408-9150","authenticated-orcid":false,"given":"Yacheng","family":"Hu","sequence":"additional","affiliation":[{"name":"Hubei Key Laboratory of Three Gorges Project for Conservation of Fishes , Yichang 443100,","place":["China"]},{"name":"Chinese Sturgeon Research Institute, China Three Gorges Corporation , Yichang 443100,","place":["China"]},{"name":"Yangtze River Biodiversity Research Center, China Three Gorges Corporation , Wuhan 430014,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0002-2379-3886","authenticated-orcid":false,"given":"Yao","family":"Ming","sequence":"additional","affiliation":[{"name":"BGI Genomics, BGI-Shenzhen , Shenzhen 518083,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5666-8200","authenticated-orcid":false,"given":"Mingzhou","family":"Bai","sequence":"additional","affiliation":[{"name":"BGI Genomics, BGI-Shenzhen , Shenzhen 518083,","place":["China"]},{"name":"Department of Biotechnology and Biomedicine, Technical University of Denmark , Lyngby 2800,","place":["Denmark"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9638-7075","authenticated-orcid":false,"given":"Juanjuan","family":"Liu","sequence":"additional","affiliation":[{"name":"Hubei Key Laboratory of Three Gorges Project for Conservation of Fishes , Yichang 443100,","place":["China"]},{"name":"Chinese Sturgeon Research Institute, China Three Gorges Corporation , Yichang 443100,","place":["China"]},{"name":"Yangtze River Biodiversity Research Center, China Three Gorges Corporation , Wuhan 430014,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0003-6852-4548","authenticated-orcid":false,"given":"Kan","family":"Xiao","sequence":"additional","affiliation":[{"name":"Hubei Key Laboratory of Three Gorges Project for Conservation of Fishes , Yichang 443100,","place":["China"]},{"name":"Chinese Sturgeon Research Institute, China Three Gorges Corporation , Yichang 443100,","place":["China"]},{"name":"Yangtze River Biodiversity Research Center, China Three Gorges Corporation , Wuhan 430014,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9350-7334","authenticated-orcid":false,"given":"Qingkai","family":"Zeng","sequence":"additional","affiliation":[{"name":"River Basin Complex Administration Center, China Three Gorges Corporation , Yichang 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443100,","place":["China"]},{"name":"Chinese Sturgeon Research Institute, China Three Gorges Corporation , Yichang 443100,","place":["China"]},{"name":"Yangtze River Biodiversity Research Center, China Three Gorges Corporation , Wuhan 430014,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4275-0112","authenticated-orcid":false,"given":"Yanhong","family":"Li","sequence":"additional","affiliation":[{"name":"BGI Genomics, BGI-Shenzhen , Shenzhen 518083,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8760-7574","authenticated-orcid":false,"given":"Zhen","family":"Yue","sequence":"additional","affiliation":[{"name":"BGI-Sanya, BGI-Shenzhen , Sanya 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430014,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0006-2553-8490","authenticated-orcid":false,"given":"Yuanjin","family":"Yang","sequence":"additional","affiliation":[{"name":"Hubei Key Laboratory of Three Gorges Project for Conservation of Fishes , Yichang 443100,","place":["China"]},{"name":"Chinese Sturgeon Research Institute, China Three Gorges Corporation , Yichang 443100,","place":["China"]},{"name":"Yangtze River Biodiversity Research Center, China Three Gorges Corporation , Wuhan 430014,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0006-6328-0734","authenticated-orcid":false,"given":"Zhiyuan","family":"Li","sequence":"additional","affiliation":[{"name":"Hubei Key Laboratory of Three Gorges Project for Conservation of Fishes , Yichang 443100,","place":["China"]},{"name":"Chinese Sturgeon Research Institute, China Three Gorges Corporation , Yichang 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evolution in paleotetraploid sterlet (Acipenser ruthenus)","volume":"8","author":"Andreyushkova","year":"2017","journal-title":"Genes"},{"key":"2024102412224861600_qzad002-B7","doi-asserted-by":"crossref","first-page":"90","DOI":"10.1186\/s13039-015-0194-8","article-title":"Segmental paleotetraploidy revealed in sterlet (Acipenser ruthenus) genome by chromosome painting","volume":"8","author":"Romanenko","year":"2015","journal-title":"Mol Cytogenet"},{"key":"2024102412224861600_qzad002-B8","doi-asserted-by":"crossref","DOI":"10.1007\/978-3-642-86659-3","volume-title":"Evolution by gene duplication","author":"Ohno","year":"1970"},{"key":"2024102412224861600_qzad002-B9","doi-asserted-by":"crossref","first-page":"411","DOI":"10.1038\/nrg.2017.26","article-title":"The evolutionary significance of polyploidy","volume":"18","author":"Van de Peer","year":"2017","journal-title":"Nat Rev Genet"},{"key":"2024102412224861600_qzad002-B10","volume-title":"Evolution by gene 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New data on the karyotypes of sturgeons (Acipenseridae, Actinopterygii) from the Russian Far East","volume":"50","author":"Vasil\u2019ev","year":"2010","journal-title":"J Ichthyol"},{"key":"2024102412224861600_qzad002-B18","doi-asserted-by":"crossref","first-page":"93","DOI":"10.25225\/fozo.v60.i2.a3.2011","article-title":"Sturgeon genetics and cytogenetics: a review related to ploidy levels and interspecific hybridization","volume":"60","author":"Havelka","year":"2011","journal-title":"Folia Zool"},{"key":"2024102412224861600_qzad002-B19","doi-asserted-by":"crossref","first-page":"888","DOI":"10.1111\/j.1471-8286.2005.01100.x","article-title":"Isolation and characterization of microsatellites in Chinese sturgeon, Acipenser sinensis","volume":"5","author":"Zhu","year":"2005","journal-title":"Mol Ecol Notes"},{"key":"2024102412224861600_qzad002-B20","doi-asserted-by":"crossref","first-page":"888","DOI":"10.1139\/g94-126","article-title":"Chromosomal nucleolar organizer regions in four 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