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Recent advances in mass spectrometry-based proteomic technologies have greatly accelerated the profiling and quantification of plant PTM events. Although several databases have been constructed to store plant PTM data, a resource including more plant species and more PTM types with quantitative dynamics still remains to be developed. In this paper, we present an integrative database of quantitative PTMs in plants named qPTMplants (http:\/\/qptmplants.omicsbio.info), which hosts 1\u00a0242\u00a0365 experimentally identified PTM events for 429\u00a0821 nonredundant sites on 123\u00a0551 proteins under 583 conditions for 23 PTM types in 43 plant species from 293 published studies, with 620\u00a0509 quantification events for 136\u00a0700 PTM sites on 55\u00a0361 proteins under 354 conditions. Moreover, the experimental details, such as conditions, samples, instruments and methods, were manually curated, while a variety of annotations, including the sequence and structural characteristics, were integrated into qPTMplants. Then, various search and browse functions were implemented to access the qPTMplants data in a user-friendly manner. Overall, we anticipate that the qPTMplants database will be a valuable resource for further research on PTMs in plants.<\/jats:p>","DOI":"10.1093\/nar\/gkab945","type":"journal-article","created":{"date-parts":[[2021,10,7]],"date-time":"2021-10-07T06:13:08Z","timestamp":1633587188000},"page":"D1491-D1499","source":"Crossref","is-referenced-by-count":30,"title":["qPTMplants: an integrative database of quantitative post-translational modifications in plants"],"prefix":"10.1093","volume":"50","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-1137-2873","authenticated-orcid":false,"given":"Han","family":"Xue","sequence":"first","affiliation":[{"name":"School of Life Sciences, Zhengzhou University, Zhengzhou 450001, China"}]},{"given":"Qingfeng","family":"Zhang","sequence":"additional","affiliation":[{"name":"State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University Cancer Center, Guangzhou 510060, China"}]},{"given":"Panqin","family":"Wang","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Zhengzhou University, Zhengzhou 450001, China"}]},{"given":"Bijin","family":"Cao","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Zhengzhou University, Zhengzhou 450001, China"}]},{"given":"Chongchong","family":"Jia","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Zhengzhou University, Zhengzhou 450001, China"}]},{"given":"Ben","family":"Cheng","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Zhengzhou University, Zhengzhou 450001, China"}]},{"given":"Yuhua","family":"Shi","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Zhengzhou University, Zhengzhou 450001, China"}]},{"given":"Wei-Feng","family":"Guo","sequence":"additional","affiliation":[{"name":"School of Electrical Engineering, Zhengzhou University, Zhengzhou 450001, China"}]},{"given":"Zhenlong","family":"Wang","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Zhengzhou University, Zhengzhou 450001, China"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9698-0610","authenticated-orcid":false,"given":"Ze-Xian","family":"Liu","sequence":"additional","affiliation":[{"name":"State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University Cancer Center, Guangzhou 510060, China"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6684-317X","authenticated-orcid":false,"given":"Han","family":"Cheng","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Zhengzhou University, Zhengzhou 450001, China"}]}],"member":"286","published-online":{"date-parts":[[2021,10,29]]},"reference":[{"key":"2022010507304322100_B1","doi-asserted-by":"crossref","first-page":"255","DOI":"10.1038\/nbt0303-255","article-title":"Proteomic analysis of post-translational modifications","volume":"21","author":"Mann","year":"2003","journal-title":"Nat. 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