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However, it remains challenging to reproduce and reuse simulations, in part, because the numerous formats and methods for simulating various subsystems and scales remain siloed by different software tools. For example, each tool must be executed through a distinct interface. To help investigators find and use simulation tools, we developed BioSimulators (https:\/\/biosimulators.org), a central registry of the capabilities of simulation tools and consistent Python, command-line\u00a0and containerized interfaces to each version of each tool. The foundation of BioSimulators is standards, such as CellML, SBML, SED-ML\u00a0and the COMBINE archive format, and validation tools for simulation projects and simulation tools that ensure these standards are used consistently. To help modelers find tools for particular projects, we have also used the registry to develop recommendation services. We anticipate that BioSimulators will help modelers exchange, reproduce, and combine simulations.<\/jats:p>","DOI":"10.1093\/nar\/gkac331","type":"journal-article","created":{"date-parts":[[2022,4,21]],"date-time":"2022-04-21T03:19:41Z","timestamp":1650511181000},"page":"W108-W114","source":"Crossref","is-referenced-by-count":26,"title":["BioSimulators: a central registry of simulation engines and services for recommending specific tools"],"prefix":"10.1093","volume":"50","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-5801-5510","authenticated-orcid":false,"given":"Bilal","family":"Shaikh","sequence":"first","affiliation":[{"name":"Icahn School of Medicine at Mount Sinai , New York, NY 10029, USA"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-7002-6386","authenticated-orcid":false,"given":"Lucian P","family":"Smith","sequence":"additional","affiliation":[{"name":"University of Washington , Seattle, WA 98105, 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